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The map label for this gene is yddW [H]

Identifier: 75909344

GI number: 75909344

Start: 3899394

End: 3900686

Strand: Direct

Name: yddW [H]

Synonym: Ava_3137

Alternate gene names: 75909344

Gene position: 3899394-3900686 (Clockwise)

Preceding gene: 75909342

Following gene: 75909345

Centisome position: 61.26

GC content: 40.84

Gene sequence:

>1293_bases
ATGGCTAGTAAGTTCCATTACAAATTCATGGGATGGCGCGTGTGGGTAGCTAACGCATCGTTTAAATCGATGAAATTAAG
TTTCCTTCATGATCAGTGGCGACTTAGGCAGTCAAATACTTATCGTCGAATTTTGCTGAAGAGTGTTTTCCCTATTCTGG
TTTTGATATCCTTCGTCTCAGTATTACTGGGAAACAGTTTTATTCCTGCTGTTGCTCAACTACCCCGCCAAGAAATTCGT
GGGGTTTGGATGACTAATAATGATTTTGACATCCTCAAGGATCGTCGCAAAGTGCAGGATGCTATGGGTAAACTGCGGCA
GTTGAATTTCAACACTGTCTACCCTGTAGTGTGGAACTCTGGCTATGTAATGTATCCTAGCGTTGTAGCACAAAAGGCTG
GTATTCAACCTTTTGTATTTCGTGGCTCGGATGGACATGATATTGTTGCAGATGTCATTAACCAAGCACATAATCGGGGT
TTGTTAGCTATTCCTTGGTTTGAGTTTGGTTTTATGGCTCCTCCAACTTCAGAATTAGCTATGAACCATCCAGAGTGGTT
AACAAAAAAGCGTAATGGTGGACAAACTTCAATTAGTGCTGCTGGTGAGGTGGTGTGGCTTAATCCTTTCCACCCACAAG
TACAACGTTTGATTACTGACCTTGTATTGGAAATTGTGACCAATTATGACGTTGATGGTATACAGTTCGATGATCACATG
AGTTTGCCTCATGAATTTGGTTACGATAAATATACAATTTCTTTGTATACTAAAGAGACCAAAAATGCACCTCCAGCTAA
TCATCAAGATCCAGCATGGGTGCGCTGGCGTTCTGATAAGATTACAGCGTTTATGGTGAAGCTAAACCAAGCTGTAAAAG
CGAGAAAACCTAAGATAATTTTCTCGGTAGCTCCCAATTATTACGATTTTGCCTACAAGTCTCAGCTACAAGATTGGCTT
GCTTGGATACGTCTCAAGATTGTTGATGAGCTAATTGTGCAAGTATATCGTCCTAACCTACAAAGTTTTATTTCTACTAT
TTCTCGTCCAGAAATTCAAGAAGCACAAAAATTAATACCAACTGGCATTGGAATTATGACAGGATTACGCAATAATGCTG
TTCCTATGTCACAAATTAAATCTCAAGTGCGGACTACGAGAGAACGGGGCTTGGGGGTAGCTTTTTTCTACTACCGTAGC
CTTTGGGATTATAGCCAGGAAGATTTAGATGAGCGCCAAGCAGGATTCCAAGCTCTTTTCCCTAATTCTGCACTCCGTGC
AAGAATTGAATAA

Upstream 100 bases:

>100_bases
AGTATGCTTCAATTTTGATTGAGGCAGAAATTTCGATGCACCACATTGAATAACTACTAATGAGCCAATTCTTTAATAAG
CAATAAAGCGGGTAGACGCT

Downstream 100 bases:

>100_bases
TATTGTTAGGGGAAGATTAAAACTATTAGGAAATTCCTTGATCATCAACTGGGATGAGGTTGGCGTAATAGATACCTAAG
GGAGAGCCGATCGCCCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MASKFHYKFMGWRVWVANASFKSMKLSFLHDQWRLRQSNTYRRILLKSVFPILVLISFVSVLLGNSFIPAVAQLPRQEIR
GVWMTNNDFDILKDRRKVQDAMGKLRQLNFNTVYPVVWNSGYVMYPSVVAQKAGIQPFVFRGSDGHDIVADVINQAHNRG
LLAIPWFEFGFMAPPTSELAMNHPEWLTKKRNGGQTSISAAGEVVWLNPFHPQVQRLITDLVLEIVTNYDVDGIQFDDHM
SLPHEFGYDKYTISLYTKETKNAPPANHQDPAWVRWRSDKITAFMVKLNQAVKARKPKIIFSVAPNYYDFAYKSQLQDWL
AWIRLKIVDELIVQVYRPNLQSFISTISRPEIQEAQKLIPTGIGIMTGLRNNAVPMSQIKSQVRTTRERGLGVAFFYYRS
LWDYSQEDLDERQAGFQALFPNSALRARIE

Sequences:

>Translated_430_residues
MASKFHYKFMGWRVWVANASFKSMKLSFLHDQWRLRQSNTYRRILLKSVFPILVLISFVSVLLGNSFIPAVAQLPRQEIR
GVWMTNNDFDILKDRRKVQDAMGKLRQLNFNTVYPVVWNSGYVMYPSVVAQKAGIQPFVFRGSDGHDIVADVINQAHNRG
LLAIPWFEFGFMAPPTSELAMNHPEWLTKKRNGGQTSISAAGEVVWLNPFHPQVQRLITDLVLEIVTNYDVDGIQFDDHM
SLPHEFGYDKYTISLYTKETKNAPPANHQDPAWVRWRSDKITAFMVKLNQAVKARKPKIIFSVAPNYYDFAYKSQLQDWL
AWIRLKIVDELIVQVYRPNLQSFISTISRPEIQEAQKLIPTGIGIMTGLRNNAVPMSQIKSQVRTTRERGLGVAFFYYRS
LWDYSQEDLDERQAGFQALFPNSALRARIE
>Mature_429_residues
ASKFHYKFMGWRVWVANASFKSMKLSFLHDQWRLRQSNTYRRILLKSVFPILVLISFVSVLLGNSFIPAVAQLPRQEIRG
VWMTNNDFDILKDRRKVQDAMGKLRQLNFNTVYPVVWNSGYVMYPSVVAQKAGIQPFVFRGSDGHDIVADVINQAHNRGL
LAIPWFEFGFMAPPTSELAMNHPEWLTKKRNGGQTSISAAGEVVWLNPFHPQVQRLITDLVLEIVTNYDVDGIQFDDHMS
LPHEFGYDKYTISLYTKETKNAPPANHQDPAWVRWRSDKITAFMVKLNQAVKARKPKIIFSVAPNYYDFAYKSQLQDWLA
WIRLKIVDELIVQVYRPNLQSFISTISRPEIQEAQKLIPTGIGIMTGLRNNAVPMSQIKSQVRTTRERGLGVAFFYYRSL
WDYSQEDLDERQAGFQALFPNSALRARIE

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=317, Percent_Identity=23.9747634069401, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 49688; Mature: 49557

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFHYKFMGWRVWVANASFKSMKLSFLHDQWRLRQSNTYRRILLKSVFPILVLISFVS
CCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLLGNSFIPAVAQLPRQEIRGVWMTNNDFDILKDRRKVQDAMGKLRQLNFNTVYPVVWNS
HHHCCCCCHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GYVMYPSVVAQKAGIQPFVFRGSDGHDIVADVINQAHNRGLLAIPWFEFGFMAPPTSELA
CEEECHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHH
MNHPEWLTKKRNGGQTSISAAGEVVWLNPFHPQVQRLITDLVLEIVTNYDVDGIQFDDHM
CCCCHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
SLPHEFGYDKYTISLYTKETKNAPPANHQDPAWVRWRSDKITAFMVKLNQAVKARKPKII
CCCHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHCCCCEEE
FSVAPNYYDFAYKSQLQDWLAWIRLKIVDELIVQVYRPNLQSFISTISRPEIQEAQKLIP
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC
TGIGIMTGLRNNAVPMSQIKSQVRTTRERGLGVAFFYYRSLWDYSQEDLDERQAGFQALF
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEC
PNSALRARIE
CCHHHHEECC
>Mature Secondary Structure 
ASKFHYKFMGWRVWVANASFKSMKLSFLHDQWRLRQSNTYRRILLKSVFPILVLISFVS
CCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLLGNSFIPAVAQLPRQEIRGVWMTNNDFDILKDRRKVQDAMGKLRQLNFNTVYPVVWNS
HHHCCCCCHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
GYVMYPSVVAQKAGIQPFVFRGSDGHDIVADVINQAHNRGLLAIPWFEFGFMAPPTSELA
CEEECHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHH
MNHPEWLTKKRNGGQTSISAAGEVVWLNPFHPQVQRLITDLVLEIVTNYDVDGIQFDDHM
CCCCHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
SLPHEFGYDKYTISLYTKETKNAPPANHQDPAWVRWRSDKITAFMVKLNQAVKARKPKII
CCCHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHCCCCEEE
FSVAPNYYDFAYKSQLQDWLAWIRLKIVDELIVQVYRPNLQSFISTISRPEIQEAQKLIP
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC
TGIGIMTGLRNNAVPMSQIKSQVRTTRERGLGVAFFYYRSLWDYSQEDLDERQAGFQALF
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEC
PNSALRARIE
CCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]