| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75909302
Identifier: 75909302
GI number: 75909302
Start: 3845802
End: 3847790
Strand: Direct
Name: 75909302
Synonym: Ava_3094
Alternate gene names: NA
Gene position: 3845802-3847790 (Clockwise)
Preceding gene: 75909301
Following gene: 75909303
Centisome position: 60.41
GC content: 42.28
Gene sequence:
>1989_bases ATGTCAACTACATTCAGAGTAACACAACAGTTTTCATCTGCCAACAACTTTCTTAAATTGGTAGGTGAACCACCTTACTT GTTCCAAACGTTCGATGATAGCAAACACAAAGATAGAAGTTTAACCCGTCAATTCTATGGCTCACTTGATGAGCATTGGG ATAAGCTTGTCGAGTTTAATAATAGGGGCGCGGGTATCTTTGTAACTGTTAATATGACCAGTGGAAACAAACGTAAAGCT GAGAATATAACTGCTGTTCGTGCGTTATTCATCGACTGTGACAACGAGTTACCTAACGAGTTTCACCTAACACCTACCGT CGTTGTTAATAGCAGCAACAACAAAGGTCATGCTTATTGGTTATTGGATAAAGCATCTAATGATGTTGCTAACTTCACCC AACATCAGCAACAACTTATCAAACATTATGGTAGTGACCCAGCCGTTAAAGACTTACCTAGAATAATGAGGTTGCCAGGG TTTAACCACATGAAAGGTGAGCCTACATTGGTCACATTCATACAAACTGGAAAGCCTTATGAGTCGATGGCATCTATCAC TGATGGTTTAGTTTCTAATGACTTTATACAACAACTAGAAAGCTTTGCTAACAAGGTTAAAAATGCACCGGAAGGTACGA GAAATGACACATTAAACACAGCAAAATATACACTAGCTGGAGCATACCCAAACAAACTACCAGAGATAGACCAACGTCTG ACTGAAGTTGCGTTAGAGAATGGTTTAACCATCGGTGAAATAAAACCAACTTTAAACAGTGGTGACGTAGGCGCACAGCG TCCTATTAAACTTGTAGGTAGTGGTAAGAGAAGTAAGAGCAACATGGTAAGGGAAGTGTTAGAGCAATTCTTCGGTGACG AGTTGCAATGGGATGAGATGAAGAATAAGCTTAGGTTTCGTGGGCAGAATGTCACTGCTGAAAAACTACACGACATTTGT GAGCGTGAGTTAGACATTGACCTACCATTTGAAAGCTTTAAACGTATGGCATCTGTTAAAGCAAGCGACAACCCGTATCA TGCTGTTCGTGAATATCTCCAAAGCTTACCCACAGTTGATAACCCTGAGCCTGTCTTGTCTGCTCTCTATCAAGCAATGG GTATCACCAACAAACTACATAGGCTTTACATTCGACGTTGGCTTATTGCTGCTGTTGGTCGTGCCATGACCCCAGGTTGT AAGGCTGACTGTGCATTGGTGTTGCAAGGTAAACAAGGTATAGGTAAGACTACTTTCTTTAATAGTTTGTTTGGTGAGTT TTTCCAAACACTAGGGGAGCATAAGAGTGACGTAGACCAACTGCTATCGATGGCTCGTAGTTGGTGTATCGAGTGGGGTG AAATAGAGAATGCGTTTAGTCGCAAAGCTGTTTCAGCCATTAAGAGTTTTATGTCCACAACTCACGACGTTTATAGGCGA CCTTATGCGGCTGAACCTGACAACTACCCACGTCATTTTATTATCTGTGGCACAACCAACCAGTCTGAGTTTCTAACTGA CTCGACAGGAAACCGTCGTTTCTGGGTTGTTAATGCTGAGAACCGTATCGATACTGCGGCTGTTAAAGAGATGCGTGATG ATGTCTGGTCAGCCGTTCTTAAGTTGTACCTCGACGGTGAGCCAAGCTTCCTTAATGAAACTGAGGTAGTAGAGTCAGCA GAAGACACCAGCCAGTATGAACAAACTCACCCTTGGTTTGCAGAAGTTTCAGCGTACATGACCCACCACAACCCATGTAC ATTAGCCGACATTATGAAGAATGCTCTAGGGTTTGAAACGAGCCGACTAAATGACAAGAAGGCACAAAGGGAAGTGAGCG ACATTCTAGATAAACTGGGGTGTACCAAAAAACAACAACGGTTAAACGGTGTTAAAGCTATTTATTGGCACAAACCTACC CTTGATAATGTCACAACTGATGATGTCAGAGTGACAACAAAGGACATCCCAACGTCTGAATACTTCTAA
Upstream 100 bases:
>100_bases GATAAACAAAATAGGTCTGGGAAGCGACCAAACTACCCCAGACCAAAGATACCAAAACACAACACAACCAACCCATTAGT AATTTATTCATAGGTTAGAT
Downstream 100 bases:
>100_bases AACCACAAGCCTGTTAACCCAACAATACACCATGACTCTCTAAGTAGGGCGTGGTGTTTTTGTTGTTGTTGTTGTACGGT GTCCACAGATAGGGGAGTGT
Product: virulence-associated E
Products: NA
Alternate protein names: Virulence-Associated Protein E; Virulence-Associated E; DNA Primase Domain Protein; Phage-Like Protein; Helicase; P-Loop ATPase And Inactivated Derivatives-Like Protein; Virulence-Associated Protein E Family Protein; Phage-Related Virulence-Associated Protein E; Primase C Terminal 2 Family; Pyocin R2_PP TraC Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; DNA Primase Domain-Containing Protein; TraC Domain-Containing Protein; Phage Integrase Protein; Prophage Ps2 Protein; Prophage Lp3 Helicase; Phage Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MSTTFRVTQQFSSANNFLKLVGEPPYLFQTFDDSKHKDRSLTRQFYGSLDEHWDKLVEFNNRGAGIFVTVNMTSGNKRKA ENITAVRALFIDCDNELPNEFHLTPTVVVNSSNNKGHAYWLLDKASNDVANFTQHQQQLIKHYGSDPAVKDLPRIMRLPG FNHMKGEPTLVTFIQTGKPYESMASITDGLVSNDFIQQLESFANKVKNAPEGTRNDTLNTAKYTLAGAYPNKLPEIDQRL TEVALENGLTIGEIKPTLNSGDVGAQRPIKLVGSGKRSKSNMVREVLEQFFGDELQWDEMKNKLRFRGQNVTAEKLHDIC ERELDIDLPFESFKRMASVKASDNPYHAVREYLQSLPTVDNPEPVLSALYQAMGITNKLHRLYIRRWLIAAVGRAMTPGC KADCALVLQGKQGIGKTTFFNSLFGEFFQTLGEHKSDVDQLLSMARSWCIEWGEIENAFSRKAVSAIKSFMSTTHDVYRR PYAAEPDNYPRHFIICGTTNQSEFLTDSTGNRRFWVVNAENRIDTAAVKEMRDDVWSAVLKLYLDGEPSFLNETEVVESA EDTSQYEQTHPWFAEVSAYMTHHNPCTLADIMKNALGFETSRLNDKKAQREVSDILDKLGCTKKQQRLNGVKAIYWHKPT LDNVTTDDVRVTTKDIPTSEYF
Sequences:
>Translated_662_residues MSTTFRVTQQFSSANNFLKLVGEPPYLFQTFDDSKHKDRSLTRQFYGSLDEHWDKLVEFNNRGAGIFVTVNMTSGNKRKA ENITAVRALFIDCDNELPNEFHLTPTVVVNSSNNKGHAYWLLDKASNDVANFTQHQQQLIKHYGSDPAVKDLPRIMRLPG FNHMKGEPTLVTFIQTGKPYESMASITDGLVSNDFIQQLESFANKVKNAPEGTRNDTLNTAKYTLAGAYPNKLPEIDQRL TEVALENGLTIGEIKPTLNSGDVGAQRPIKLVGSGKRSKSNMVREVLEQFFGDELQWDEMKNKLRFRGQNVTAEKLHDIC ERELDIDLPFESFKRMASVKASDNPYHAVREYLQSLPTVDNPEPVLSALYQAMGITNKLHRLYIRRWLIAAVGRAMTPGC KADCALVLQGKQGIGKTTFFNSLFGEFFQTLGEHKSDVDQLLSMARSWCIEWGEIENAFSRKAVSAIKSFMSTTHDVYRR PYAAEPDNYPRHFIICGTTNQSEFLTDSTGNRRFWVVNAENRIDTAAVKEMRDDVWSAVLKLYLDGEPSFLNETEVVESA EDTSQYEQTHPWFAEVSAYMTHHNPCTLADIMKNALGFETSRLNDKKAQREVSDILDKLGCTKKQQRLNGVKAIYWHKPT LDNVTTDDVRVTTKDIPTSEYF >Mature_661_residues STTFRVTQQFSSANNFLKLVGEPPYLFQTFDDSKHKDRSLTRQFYGSLDEHWDKLVEFNNRGAGIFVTVNMTSGNKRKAE NITAVRALFIDCDNELPNEFHLTPTVVVNSSNNKGHAYWLLDKASNDVANFTQHQQQLIKHYGSDPAVKDLPRIMRLPGF NHMKGEPTLVTFIQTGKPYESMASITDGLVSNDFIQQLESFANKVKNAPEGTRNDTLNTAKYTLAGAYPNKLPEIDQRLT EVALENGLTIGEIKPTLNSGDVGAQRPIKLVGSGKRSKSNMVREVLEQFFGDELQWDEMKNKLRFRGQNVTAEKLHDICE RELDIDLPFESFKRMASVKASDNPYHAVREYLQSLPTVDNPEPVLSALYQAMGITNKLHRLYIRRWLIAAVGRAMTPGCK ADCALVLQGKQGIGKTTFFNSLFGEFFQTLGEHKSDVDQLLSMARSWCIEWGEIENAFSRKAVSAIKSFMSTTHDVYRRP YAAEPDNYPRHFIICGTTNQSEFLTDSTGNRRFWVVNAENRIDTAAVKEMRDDVWSAVLKLYLDGEPSFLNETEVVESAE DTSQYEQTHPWFAEVSAYMTHHNPCTLADIMKNALGFETSRLNDKKAQREVSDILDKLGCTKKQQRLNGVKAIYWHKPTL DNVTTDDVRVTTKDIPTSEYF
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75105; Mature: 74974
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTFRVTQQFSSANNFLKLVGEPPYLFQTFDDSKHKDRSLTRQFYGSLDEHWDKLVEFN CCCCHHHHHHHHHHCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC NRGAGIFVTVNMTSGNKRKAENITAVRALFIDCDNELPNEFHLTPTVVVNSSNNKGHAYW CCCCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCEECCEEEEEECCCCCCEEEE LLDKASNDVANFTQHQQQLIKHYGSDPAVKDLPRIMRLPGFNHMKGEPTLVTFIQTGKPY EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH ESMASITDGLVSNDFIQQLESFANKVKNAPEGTRNDTLNTAKYTLAGAYPNKLPEIDQRL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHH TEVALENGLTIGEIKPTLNSGDVGAQRPIKLVGSGKRSKSNMVREVLEQFFGDELQWDEM HHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH KNKLRFRGQNVTAEKLHDICERELDIDLPFESFKRMASVKASDNPYHAVREYLQSLPTVD HHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC NPEPVLSALYQAMGITNKLHRLYIRRWLIAAVGRAMTPGCKADCALVLQGKQGIGKTTFF CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHH NSLFGEFFQTLGEHKSDVDQLLSMARSWCIEWGEIENAFSRKAVSAIKSFMSTTHDVYRR HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PYAAEPDNYPRHFIICGTTNQSEFLTDSTGNRRFWVVNAENRIDTAAVKEMRDDVWSAVL CCCCCCCCCCCEEEEEECCCCCHHEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH KLYLDGEPSFLNETEVVESAEDTSQYEQTHPWFAEVSAYMTHHNPCTLADIMKNALGFET HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCH SRLNDKKAQREVSDILDKLGCTKKQQRLNGVKAIYWHKPTLDNVTTDDVRVTTKDIPTSE HHCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC YF CC >Mature Secondary Structure STTFRVTQQFSSANNFLKLVGEPPYLFQTFDDSKHKDRSLTRQFYGSLDEHWDKLVEFN CCCHHHHHHHHHHCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC NRGAGIFVTVNMTSGNKRKAENITAVRALFIDCDNELPNEFHLTPTVVVNSSNNKGHAYW CCCCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCEECCEEEEEECCCCCCEEEE LLDKASNDVANFTQHQQQLIKHYGSDPAVKDLPRIMRLPGFNHMKGEPTLVTFIQTGKPY EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH ESMASITDGLVSNDFIQQLESFANKVKNAPEGTRNDTLNTAKYTLAGAYPNKLPEIDQRL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHH TEVALENGLTIGEIKPTLNSGDVGAQRPIKLVGSGKRSKSNMVREVLEQFFGDELQWDEM HHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH KNKLRFRGQNVTAEKLHDICERELDIDLPFESFKRMASVKASDNPYHAVREYLQSLPTVD HHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC NPEPVLSALYQAMGITNKLHRLYIRRWLIAAVGRAMTPGCKADCALVLQGKQGIGKTTFF CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHH NSLFGEFFQTLGEHKSDVDQLLSMARSWCIEWGEIENAFSRKAVSAIKSFMSTTHDVYRR HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PYAAEPDNYPRHFIICGTTNQSEFLTDSTGNRRFWVVNAENRIDTAAVKEMRDDVWSAVL CCCCCCCCCCCEEEEEECCCCCHHEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH KLYLDGEPSFLNETEVVESAEDTSQYEQTHPWFAEVSAYMTHHNPCTLADIMKNALGFET HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCH SRLNDKKAQREVSDILDKLGCTKKQQRLNGVKAIYWHKPTLDNVTTDDVRVTTKDIPTSE HHCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC YF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA