| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909247
Identifier: 75909247
GI number: 75909247
Start: 3763423
End: 3763647
Strand: Direct
Name: 75909247
Synonym: Ava_3038
Alternate gene names: NA
Gene position: 3763423-3763647 (Clockwise)
Preceding gene: 75909246
Following gene: 75909248
Centisome position: 59.12
GC content: 44.0
Gene sequence:
>225_bases ATGTCAAACTTGTTGCAAAGAATCACAGTCAACCCTAAACAGTGTGGTGGTCGTCCCTGCATTCGTGGTATGAGAATTAG GGTATCAGATGTACTTGATTTGTTAGCTGCGGGACTTAGCTCCGAGCAAATCTTAGCAGAAATGCCCGATTTAGAGATGG ATGATTTGAAAGCATCACTCGCTTACGCTGCTCGTAAATTAAATCATCCCATCCTGACGGCATGA
Upstream 100 bases:
>100_bases TTTAGTTTGACTGGTGAACCGATAGAAATACGGCAAGCTGTACAAGTTTAAATGAATTTACACCACCCTGGAAGTAATTA TTTGTGGAGTCTGAATCTAA
Downstream 100 bases:
>100_bases CAACGATTTGGATTGATGCACATCTGTCGCCGGTGATTGCTACCTGGATTAACAACACATTTGGGATTACAGCATTGGCA TTGCGTGACATTGGCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSNLLQRITVNPKQCGGRPCIRGMRIRVSDVLDLLAAGLSSEQILAEMPDLEMDDLKASLAYAARKLNHPILTA
Sequences:
>Translated_74_residues MSNLLQRITVNPKQCGGRPCIRGMRIRVSDVLDLLAAGLSSEQILAEMPDLEMDDLKASLAYAARKLNHPILTA >Mature_73_residues SNLLQRITVNPKQCGGRPCIRGMRIRVSDVLDLLAAGLSSEQILAEMPDLEMDDLKASLAYAARKLNHPILTA
Specific function: Unknown
COG id: COG2442
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8105; Mature: 7973
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLQRITVNPKQCGGRPCIRGMRIRVSDVLDLLAAGLSSEQILAEMPDLEMDDLKASL CCCHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH AYAARKLNHPILTA HHHHHHHCCCCCCC >Mature Secondary Structure SNLLQRITVNPKQCGGRPCIRGMRIRVSDVLDLLAAGLSSEQILAEMPDLEMDDLKASL CCHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH AYAARKLNHPILTA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA