| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909233
Identifier: 75909233
GI number: 75909233
Start: 3747417
End: 3748076
Strand: Direct
Name: 75909233
Synonym: Ava_3024
Alternate gene names: NA
Gene position: 3747417-3748076 (Clockwise)
Preceding gene: 75909232
Following gene: 75909234
Centisome position: 58.87
GC content: 31.36
Gene sequence:
>660_bases GTGATAACGCTTTATATCGAAACTAATTTCTTTATTGGGTTTGCTAAAAGCCAGGATAAGGATTCTGAAAAATTAGTCAA TAACATATCGCCAGATAGAAATACACTGATTAAAATTGTGACTCTTTCAGTGTGTTGTATGGAATCTCTTTCTGTACTAA ATGATGAAATTAGTATAAGCAATCGTTTCCAAAATAATTTGGATTTTGAAAGAAATAAACTAAAAGGAGATAAAAATTCC CCATATTCTCAAGAAATTCAAAGATACCTTGAACAAGCCAAAATTAAAAATAAAGCGCGATTGAATTATATAAATAATCG TCTCTTTCAAGTTCTTGAATGGGCTACTAAGAATGTAGAGTTAATACAATTAAAACCAGATATACTAAGTGCAAGTCTTC AACAAATACTTATTACTGATCAAACAGATAACCTAATTTTGCATTGTATTCTTGATCACGCCCGAACTCATCAGAACACA TATCCAAATGGGAAGAAAATCTTATTAACTGAAAACTCTAGAGACTTTGGTACAAAAGAAATCAAGGAAATATTGCAGGG AGTTGGTATCAAGTATCTTACTAGCACGGAAAAGTTTCTAGGTTGGCTGCAATCAAAAAACATAGAAGCTTACAATTCCA TACAACCAACTTTTGGATGA
Upstream 100 bases:
>100_bases CTGGAAAACTGATAATCCACCTAAATCAAAAGAATTAAAGCAGATAGGTTTCGTGGAAAAGCTAGCCGATGCGGCGGTAC AGTGAAGGGTCGTAATTTTA
Downstream 100 bases:
>100_bases CTTTAATTCATCACACTTACGATCATGAACTATCAATGGCTAATCTGTGATATATCCATCAAGTTGATCATCTCACGCCA CTGTGGGCGACTATTTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MITLYIETNFFIGFAKSQDKDSEKLVNNISPDRNTLIKIVTLSVCCMESLSVLNDEISISNRFQNNLDFERNKLKGDKNS PYSQEIQRYLEQAKIKNKARLNYINNRLFQVLEWATKNVELIQLKPDILSASLQQILITDQTDNLILHCILDHARTHQNT YPNGKKILLTENSRDFGTKEIKEILQGVGIKYLTSTEKFLGWLQSKNIEAYNSIQPTFG
Sequences:
>Translated_219_residues MITLYIETNFFIGFAKSQDKDSEKLVNNISPDRNTLIKIVTLSVCCMESLSVLNDEISISNRFQNNLDFERNKLKGDKNS PYSQEIQRYLEQAKIKNKARLNYINNRLFQVLEWATKNVELIQLKPDILSASLQQILITDQTDNLILHCILDHARTHQNT YPNGKKILLTENSRDFGTKEIKEILQGVGIKYLTSTEKFLGWLQSKNIEAYNSIQPTFG >Mature_219_residues MITLYIETNFFIGFAKSQDKDSEKLVNNISPDRNTLIKIVTLSVCCMESLSVLNDEISISNRFQNNLDFERNKLKGDKNS PYSQEIQRYLEQAKIKNKARLNYINNRLFQVLEWATKNVELIQLKPDILSASLQQILITDQTDNLILHCILDHARTHQNT YPNGKKILLTENSRDFGTKEIKEILQGVGIKYLTSTEKFLGWLQSKNIEAYNSIQPTFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25276; Mature: 25276
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLYIETNFFIGFAKSQDKDSEKLVNNISPDRNTLIKIVTLSVCCMESLSVLNDEISIS CEEEEEECCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NRFQNNLDFERNKLKGDKNSPYSQEIQRYLEQAKIKNKARLNYINNRLFQVLEWATKNVE HHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEE LIQLKPDILSASLQQILITDQTDNLILHCILDHARTHQNTYPNGKKILLTENSRDFGTKE EEEECHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHH IKEILQGVGIKYLTSTEKFLGWLQSKNIEAYNSIQPTFG HHHHHHHCCEEEEHHHHHHHHHHHCCCCCHHCCCCCCCC >Mature Secondary Structure MITLYIETNFFIGFAKSQDKDSEKLVNNISPDRNTLIKIVTLSVCCMESLSVLNDEISIS CEEEEEECCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NRFQNNLDFERNKLKGDKNSPYSQEIQRYLEQAKIKNKARLNYINNRLFQVLEWATKNVE HHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEE LIQLKPDILSASLQQILITDQTDNLILHCILDHARTHQNTYPNGKKILLTENSRDFGTKE EEEECHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHH IKEILQGVGIKYLTSTEKFLGWLQSKNIEAYNSIQPTFG HHHHHHHCCEEEEHHHHHHHHHHHCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA