| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909211
Identifier: 75909211
GI number: 75909211
Start: 3721131
End: 3723788
Strand: Direct
Name: 75909211
Synonym: Ava_3002
Alternate gene names: NA
Gene position: 3721131-3723788 (Clockwise)
Preceding gene: 75909210
Following gene: 75909215
Centisome position: 58.46
GC content: 45.41
Gene sequence:
>2658_bases ATGCTTCATCCAGTTCTGCCGCCTGCACCTCCTTCCCTTGTTGAACCTATACAACCTGCAAATTCCACCCCATCTGCTAG TGATAGTCGATTTCATTTAGTGAGTGAGATTGATACCACTAAGCAAAACAAACTAGAGACCGCCAAACCCCCAGAGAAAC AGTTTCAAAATCCAACTGTAGAGAAAACAGAAGATTCTTTGCAGTTACCAAGACCCACCAGCAATAAAACAGAGCATTTA ATTGCAACTCCTGTTCTGGCAAAACCCAGTACACCAGAAATCTTCACTTCAGAATTTTCCCCCCTTACCCCTTCTAGTAG CGCTGTTAATTTAGGACAAACCTTGACAATTGGTTATTCTGTCCAAAAAAATACAAGCACTAATTCCCCAGTCTTCCCTA CAGCGACAATTCCTCAGTCTGTCCAAAAAAATACAAGCACTAATTCCCCAGTCTTCCCTACAGCGACAATTCCTCAATCT GTCCAAAAAAATACAAGCACTAATTCCCCAGTCTTCCCTACAGCGACAATTCCTCCAGATGTATCACCTCAAACAAAACT AGTCGCCTCGGCATTGACTAAGCAAGAACAGAAAGACGAGGTTACTGTACAACAGACTGGGGACAAAATTAATATCTCTG TATCTGATAGTGACCCGGTAGTTAATAATCAACCAATTCAAAATGTTATTGAGTTTAAGTCGCGTAACTCGTTAAATAAA CTATCAATACAAACTGTCACGCCAGCTCTTAGTTCACAAGCACAGTCACCAATACCAACTCGAACACCTGCTACACCCAA CAATACACTACCAGCCCGACAAAGAATTGTAGAAGTGACTTCAGATCGGCAGGAGTATGATGAGCAAAGACGCGTGATTA CTGCCGAAGGTAATGTATTAGTACGGTTTGATGGGGCGCTACTGGATGCCGATCGCGTGCAGGTAAATTTAGATAACTTG ATTGCGGCGGGAGAGGGAGATGTAGTTTTAACTAGAGGAGATCAGTTATTACGAGGACAACGCTTTACTTATAATTTTGT CCAAGACAGTGGGGAATTAGAAAACGGAAGCGGTGAAATCAACGTACCCTCAGCATCAAGAGATTTTGCCTTCTTACCCA CTGATGTGACAGCTGGTGGCGTACCACAACAACCACCAAGCAACTCTATCCGCACCAATCAACCTCTTTCTAATGTCAGC AGTCCCGGTGGCATTGAATTTACATTTGGGGGAGGGAGCGAAGCGAGTAATCTGCCTCCTCCCAAAGCTGGGGGTGAGGT GAAGCGTATTAGGTTTGAAGCCGAGCAAATTGAGTTTTATCCCCGTGGTTGGCAAGCGCGAAATGTGCGCCTGACAAATG ACCCATTTTCACCACCAGAATTGGAGTTACGGGCAGATACAGTCACCGTCACACGGGAGGCTCCTTTAATTGATCGGATC ACCACACAGCGACAGCGTTTAGTCTTTGACCAAGGCTTGACCTTACCAATCCCCATAAATCAGCAGAAAATCGACCGTCG AGAACGGGATAGCACACCCTTTATCGTCTCTCCTGGCTATGATGGCGATAAGCGGGGTGGTGTTTTTATTGAGCGCGGTT TTACACCTATTAGTACGGATAGTACTAATTTGCAGATCACTCCCCAGTTTTTCGTCCAGAAAGCCATACAAGGTAATGAT GATGTGACGGGGTTATTTGGTGTCAAAGCCAGATTAAATTCTGTTTTAGGTACCCGATCTGTACTTGAAGGTATCGGAGA ACTAACTAGTTTTAATTTTGACGACATAGACGAGAATTTAAAGGCGAGTTTACGTTTACGCCAAGCCTTAGGCGATCGCA ATCCTCATGTGGTGAATTGGGAATACAGTTACCGCGATCGCCTCTATAACGGTACACTTGGCTTTCAAACCGTCCAAAGT AGTTTGGGTGGTGTCATTACTTCTCCAGTTATTCCTCTGGGGAACTCTGGGATCAACCTCAGCTATCAAGCCGGCGCGCA GTATATCAACGCCAACACTGACCGCCAAGACTTGCTAGATCCCATCAGAACCAATGATCGAGTCTCTCTTGGTCGCCTAC AAGGTAGCGCCGCCTTGAGTAAAGGGTTTTTACTATGGCAAGGAAAACCACTACCACCCACAGCCACGGAAGGTTTAAGA TATACAGCTACTCCTGTAGTTCCTTACTTACAGGCGATCGCCGGTATTACTGGTACTTCTAGCTACTACACCAATGGCGA CAACCAAAGCAGCCTGACTGGCACAGTTGGCTTAGTAGGGCAGCTTGGTCATTTTTCTCGCCCCTTCCTTGACTACACAG CTTTTAACGTCCGTTATTCCCAAGGTTTAACCAGTGGACTATCACCCTTTTTGTTTGACCGCTACGTTGATGAAAGAGTA CTCAGTGCCGGCATCTCCCAACAAATTTACGGCCCTTGGCGTTTAGGTTTTCAAACATCAATTAACTTAGATACTGGTAA AGAAAGTAGCACAGACTACATTGTTGAATATAGCCGACGCACTTACGGAATCACCTTGCGCTACAATCCGGTACTGGAAT TAGGCGCTTTTAGCATCCGCATTAGTGACTTTAACTGGACTGGCGGTGCAGATCCATTTTCGGAGGTTAGACCAGTTGTC GGTGGTGTGAGTCAGTAG
Upstream 100 bases:
>100_bases TCCTTTGCAGTGTAGTGTCTCCCTCAGGGAGTTTACTCAAGCACAGGTGAATTCATTCCGGCTATTAATTGGCTATTTGT TAGGTTGATTGTGTCCCAAT
Downstream 100 bases:
>100_bases TGGAGACTACCTTTTTTGATAAACAACTGACTATTGACAATTTAAAGGTAAAGTAATTGTAAACGTAGTCCCAACACCTT CTTGGGAGTTAAAAGCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MLHPVLPPAPPSLVEPIQPANSTPSASDSRFHLVSEIDTTKQNKLETAKPPEKQFQNPTVEKTEDSLQLPRPTSNKTEHL IATPVLAKPSTPEIFTSEFSPLTPSSSAVNLGQTLTIGYSVQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPQS VQKNTSTNSPVFPTATIPPDVSPQTKLVASALTKQEQKDEVTVQQTGDKINISVSDSDPVVNNQPIQNVIEFKSRNSLNK LSIQTVTPALSSQAQSPIPTRTPATPNNTLPARQRIVEVTSDRQEYDEQRRVITAEGNVLVRFDGALLDADRVQVNLDNL IAAGEGDVVLTRGDQLLRGQRFTYNFVQDSGELENGSGEINVPSASRDFAFLPTDVTAGGVPQQPPSNSIRTNQPLSNVS SPGGIEFTFGGGSEASNLPPPKAGGEVKRIRFEAEQIEFYPRGWQARNVRLTNDPFSPPELELRADTVTVTREAPLIDRI TTQRQRLVFDQGLTLPIPINQQKIDRRERDSTPFIVSPGYDGDKRGGVFIERGFTPISTDSTNLQITPQFFVQKAIQGND DVTGLFGVKARLNSVLGTRSVLEGIGELTSFNFDDIDENLKASLRLRQALGDRNPHVVNWEYSYRDRLYNGTLGFQTVQS SLGGVITSPVIPLGNSGINLSYQAGAQYINANTDRQDLLDPIRTNDRVSLGRLQGSAALSKGFLLWQGKPLPPTATEGLR YTATPVVPYLQAIAGITGTSSYYTNGDNQSSLTGTVGLVGQLGHFSRPFLDYTAFNVRYSQGLTSGLSPFLFDRYVDERV LSAGISQQIYGPWRLGFQTSINLDTGKESSTDYIVEYSRRTYGITLRYNPVLELGAFSIRISDFNWTGGADPFSEVRPVV GGVSQ
Sequences:
>Translated_885_residues MLHPVLPPAPPSLVEPIQPANSTPSASDSRFHLVSEIDTTKQNKLETAKPPEKQFQNPTVEKTEDSLQLPRPTSNKTEHL IATPVLAKPSTPEIFTSEFSPLTPSSSAVNLGQTLTIGYSVQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPQS VQKNTSTNSPVFPTATIPPDVSPQTKLVASALTKQEQKDEVTVQQTGDKINISVSDSDPVVNNQPIQNVIEFKSRNSLNK LSIQTVTPALSSQAQSPIPTRTPATPNNTLPARQRIVEVTSDRQEYDEQRRVITAEGNVLVRFDGALLDADRVQVNLDNL IAAGEGDVVLTRGDQLLRGQRFTYNFVQDSGELENGSGEINVPSASRDFAFLPTDVTAGGVPQQPPSNSIRTNQPLSNVS SPGGIEFTFGGGSEASNLPPPKAGGEVKRIRFEAEQIEFYPRGWQARNVRLTNDPFSPPELELRADTVTVTREAPLIDRI TTQRQRLVFDQGLTLPIPINQQKIDRRERDSTPFIVSPGYDGDKRGGVFIERGFTPISTDSTNLQITPQFFVQKAIQGND DVTGLFGVKARLNSVLGTRSVLEGIGELTSFNFDDIDENLKASLRLRQALGDRNPHVVNWEYSYRDRLYNGTLGFQTVQS SLGGVITSPVIPLGNSGINLSYQAGAQYINANTDRQDLLDPIRTNDRVSLGRLQGSAALSKGFLLWQGKPLPPTATEGLR YTATPVVPYLQAIAGITGTSSYYTNGDNQSSLTGTVGLVGQLGHFSRPFLDYTAFNVRYSQGLTSGLSPFLFDRYVDERV LSAGISQQIYGPWRLGFQTSINLDTGKESSTDYIVEYSRRTYGITLRYNPVLELGAFSIRISDFNWTGGADPFSEVRPVV GGVSQ >Mature_885_residues MLHPVLPPAPPSLVEPIQPANSTPSASDSRFHLVSEIDTTKQNKLETAKPPEKQFQNPTVEKTEDSLQLPRPTSNKTEHL IATPVLAKPSTPEIFTSEFSPLTPSSSAVNLGQTLTIGYSVQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPQS VQKNTSTNSPVFPTATIPPDVSPQTKLVASALTKQEQKDEVTVQQTGDKINISVSDSDPVVNNQPIQNVIEFKSRNSLNK LSIQTVTPALSSQAQSPIPTRTPATPNNTLPARQRIVEVTSDRQEYDEQRRVITAEGNVLVRFDGALLDADRVQVNLDNL IAAGEGDVVLTRGDQLLRGQRFTYNFVQDSGELENGSGEINVPSASRDFAFLPTDVTAGGVPQQPPSNSIRTNQPLSNVS SPGGIEFTFGGGSEASNLPPPKAGGEVKRIRFEAEQIEFYPRGWQARNVRLTNDPFSPPELELRADTVTVTREAPLIDRI TTQRQRLVFDQGLTLPIPINQQKIDRRERDSTPFIVSPGYDGDKRGGVFIERGFTPISTDSTNLQITPQFFVQKAIQGND DVTGLFGVKARLNSVLGTRSVLEGIGELTSFNFDDIDENLKASLRLRQALGDRNPHVVNWEYSYRDRLYNGTLGFQTVQS SLGGVITSPVIPLGNSGINLSYQAGAQYINANTDRQDLLDPIRTNDRVSLGRLQGSAALSKGFLLWQGKPLPPTATEGLR YTATPVVPYLQAIAGITGTSSYYTNGDNQSSLTGTVGLVGQLGHFSRPFLDYTAFNVRYSQGLTSGLSPFLFDRYVDERV LSAGISQQIYGPWRLGFQTSINLDTGKESSTDYIVEYSRRTYGITLRYNPVLELGAFSIRISDFNWTGGADPFSEVRPVV GGVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96501; Mature: 96501
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHPVLPPAPPSLVEPIQPANSTPSASDSRFHLVSEIDTTKQNKLETAKPPEKQFQNPTV CCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEHHCCCHHCCCCCCCCCHHHHCCCCC EKTEDSLQLPRPTSNKTEHLIATPVLAKPSTPEIFTSEFSPLTPSSSAVNLGQTLTIGYS CCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEE VQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPPD EECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC VSPQTKLVASALTKQEQKDEVTVQQTGDKINISVSDSDPVVNNQPIQNVIEFKSRNSLNK CCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE LSIQTVTPALSSQAQSPIPTRTPATPNNTLPARQRIVEVTSDRQEYDEQRRVITAEGNVL EEEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEE VRFDGALLDADRVQVNLDNLIAAGEGDVVLTRGDQLLRGQRFTYNFVQDSGELENGSGEI EEECCEEEECCCEEEEHHHEEECCCCCEEEECCCHHHCCCCEEEEEECCCCCCCCCCCCE NVPSASRDFAFLPTDVTAGGVPQQPPSNSIRTNQPLSNVSSPGGIEFTFGGGSEASNLPP ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCC PKAGGEVKRIRFEAEQIEFYPRGWQARNVRLTNDPFSPPELELRADTVTVTREAPLIDRI CCCCCCEEEEEEEEEHEEEECCCCCCCCEEECCCCCCCCCEEEEEEEEEEEECCCHHHHH TTQRQRLVFDQGLTLPIPINQQKIDRRERDSTPFIVSPGYDGDKRGGVFIERGFTPISTD HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCC STNLQITPQFFVQKAIQGNDDVTGLFGVKARLNSVLGTRSVLEGIGELTSFNFDDIDENL CCCEEECHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KASLRLRQALGDRNPHVVNWEYSYRDRLYNGTLGFQTVQSSLGGVITSPVIPLGNSGINL HHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCEECCCCEECCCCCCEE SYQAGAQYINANTDRQDLLDPIRTNDRVSLGRLQGSAALSKGFLLWQGKPLPPTATEGLR EECCCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCHHHHCCEEEECCCCCCCCCCCCCE YTATPVVPYLQAIAGITGTSSYYTNGDNQSSLTGTVGLVGQLGHFSRPFLDYTAFNVRYS EECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEHH QGLTSGLSPFLFDRYVDERVLSAGISQQIYGPWRLGFQTSINLDTGKESSTDYIVEYSRR CCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCEEECEEEEEECCCCCCCCCCEEEEECCC TYGITLRYNPVLELGAFSIRISDFNWTGGADPFSEVRPVVGGVSQ EEEEEEEECCEEEECEEEEEEECCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MLHPVLPPAPPSLVEPIQPANSTPSASDSRFHLVSEIDTTKQNKLETAKPPEKQFQNPTV CCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEHHCCCHHCCCCCCCCCHHHHCCCCC EKTEDSLQLPRPTSNKTEHLIATPVLAKPSTPEIFTSEFSPLTPSSSAVNLGQTLTIGYS CCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEE VQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPQSVQKNTSTNSPVFPTATIPPD EECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC VSPQTKLVASALTKQEQKDEVTVQQTGDKINISVSDSDPVVNNQPIQNVIEFKSRNSLNK CCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCE LSIQTVTPALSSQAQSPIPTRTPATPNNTLPARQRIVEVTSDRQEYDEQRRVITAEGNVL EEEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEE VRFDGALLDADRVQVNLDNLIAAGEGDVVLTRGDQLLRGQRFTYNFVQDSGELENGSGEI EEECCEEEECCCEEEEHHHEEECCCCCEEEECCCHHHCCCCEEEEEECCCCCCCCCCCCE NVPSASRDFAFLPTDVTAGGVPQQPPSNSIRTNQPLSNVSSPGGIEFTFGGGSEASNLPP ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCC PKAGGEVKRIRFEAEQIEFYPRGWQARNVRLTNDPFSPPELELRADTVTVTREAPLIDRI CCCCCCEEEEEEEEEHEEEECCCCCCCCEEECCCCCCCCCEEEEEEEEEEEECCCHHHHH TTQRQRLVFDQGLTLPIPINQQKIDRRERDSTPFIVSPGYDGDKRGGVFIERGFTPISTD HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCC STNLQITPQFFVQKAIQGNDDVTGLFGVKARLNSVLGTRSVLEGIGELTSFNFDDIDENL CCCEEECHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KASLRLRQALGDRNPHVVNWEYSYRDRLYNGTLGFQTVQSSLGGVITSPVIPLGNSGINL HHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCEECCCCEECCCCCCEE SYQAGAQYINANTDRQDLLDPIRTNDRVSLGRLQGSAALSKGFLLWQGKPLPPTATEGLR EECCCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCHHHHCCEEEECCCCCCCCCCCCCE YTATPVVPYLQAIAGITGTSSYYTNGDNQSSLTGTVGLVGQLGHFSRPFLDYTAFNVRYS EECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEHH QGLTSGLSPFLFDRYVDERVLSAGISQQIYGPWRLGFQTSINLDTGKESSTDYIVEYSRR CCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCEEECEEEEEECCCCCCCCCCEEEEECCC TYGITLRYNPVLELGAFSIRISDFNWTGGADPFSEVRPVVGGVSQ EEEEEEEECCEEEECEEEEEEECCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA