| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909061
Identifier: 75909061
GI number: 75909061
Start: 3536587
End: 3538011
Strand: Direct
Name: 75909061
Synonym: Ava_2849
Alternate gene names: NA
Gene position: 3536587-3538011 (Clockwise)
Preceding gene: 75909053
Following gene: 75909065
Centisome position: 55.56
GC content: 44.14
Gene sequence:
>1425_bases ATGCCAAATACAGTATTTTCCCCTTTACTCATACTCGTATTAGGACTTACTCTTACTCAAACTATCGGTTGTGCAAATAA TCCAGATGATTCTGTCGTTGCCCAAACTTCGACGAAGCCAGAACCTCAAATTGTTGTACAGCCAGGGGAAATTAGGGCTT TACCAGGAAAGTTAGATAACATCCCTGTATTTAACAGTAATAGTCCAGAGTGGGTAAAGAGTGAAGGAATTTTGCTGTCT ACTTTTCCCACAAATGGTAAAAAAACACCAACAGCACACCTCAATTTTCCTTTTCAGGGACGGTTTGATTTATTTGCCCA CCATTACACCCACACACCTAAGGATTTACAAACGCTTTACCTGGGGGTAATTGTCAATAATCCTGGGAAAAAACCTGTGA CAGTCGATGTCTTACAAGCAGCCAGTTATCTGATGCAGGATGCACCTTTTGTCACCTTACCCCCCTACATAGAAAACAAC GATGGTAAAGCCTACTCAGGGCCAGGGGCTAGGGCTGTTGCTGATGTTTTGCGGGGTGTGAGACAGGCTGATTTTCCCGC TAAGTTGGTGATTCCCCCTGGACAAAGCCGGATGTTGCTGAATCATCCTATTCCTGTACGGAATTTGGCAAAGCCTGTCA ATGGTCGCTCAAGTTTTTTGCGTTTGCGGAGTAGCGATAAAATTTACACAGCAAGCTTGGCGATGTTTGCTAAAAAAAAT ACTGATGGTTCTGACCGTGCGCCTACTATGGCTGAATGGCAAGCTTTACTCAATAATGGTAACTTTGCTGGGCCACGGGA TAAAACGCCTACTCCACCCAATGCTACCAGTGGGGCGTTGATTTATGGTCGTGTGGCTGGCGTTTCTCAAGGTTCCCAAT GGCAAGCCATTCTCACTGATAATCCCCAGGCAACAACTCTCACCATACCCCAAGTCGGCAAAGGCATTTCTTACCCTATA GTAACTCTGCGTGGTGGTCGATTGGGTACAGGACAAAGCCAAACAGCTAAGATGCTGGTGCGCTATCCTGATACGGCATA TGAAGCGCATGGTAATTACGGTGTGGAATATAACCTCAACTTGCCCTTGAAGAATAACACTAACCAAACGCAAAAGGTGA CTATTACTTTAGAAACACCCTTAAAGGAAGATAAGTTATCTCAAGGTGGTGTACGCTTTCGTAAACCTTCCTTAGACTTT CCCTTTTTCCGAGGTACAGTCAGGCTACGTTACTTTGATGACCAGGGAAAACAAAAGACGCGTTACGTACATTTATGGCA TAGAACCGGACAGGTTTTAGAACCATTAGTACAACTTGTTATGCCACCATCAAGTAGACGCAATGTGCAGGTAGATGTAA TTTATCCACCAGATTCCACACCACCCCAGATTTTGACTGTAAGAACTTCGTCAATTAATAATTAG
Upstream 100 bases:
>100_bases ACTACGTTAATTATACTTGCATAAAAACAGCGATCGCCCTCAGAAATTAGTATACATAAATTTGTAGTGATAATCAGTTG TATTTAACACCACATCTCTT
Downstream 100 bases:
>100_bases CCGCTTTATCTAAATAAAATATGACAAGCGTAGGCCTAGCCTACGCCCAAACTTACTTACCGCCGTAGAAAAAGGCAATA TCTTTTTCTTTCAGGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPNTVFSPLLILVLGLTLTQTIGCANNPDDSVVAQTSTKPEPQIVVQPGEIRALPGKLDNIPVFNSNSPEWVKSEGILLS TFPTNGKKTPTAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENN DGKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLAKPVNGRSSFLRLRSSDKIYTASLAMFAKKN TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKGISYPI VTLRGGRLGTGQSQTAKMLVRYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTITLETPLKEDKLSQGGVRFRKPSLDF PFFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQLVMPPSSRRNVQVDVIYPPDSTPPQILTVRTSSINN
Sequences:
>Translated_474_residues MPNTVFSPLLILVLGLTLTQTIGCANNPDDSVVAQTSTKPEPQIVVQPGEIRALPGKLDNIPVFNSNSPEWVKSEGILLS TFPTNGKKTPTAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENN DGKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLAKPVNGRSSFLRLRSSDKIYTASLAMFAKKN TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKGISYPI VTLRGGRLGTGQSQTAKMLVRYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTITLETPLKEDKLSQGGVRFRKPSLDF PFFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQLVMPPSSRRNVQVDVIYPPDSTPPQILTVRTSSINN >Mature_473_residues PNTVFSPLLILVLGLTLTQTIGCANNPDDSVVAQTSTKPEPQIVVQPGEIRALPGKLDNIPVFNSNSPEWVKSEGILLST FPTNGKKTPTAHLNFPFQGRFDLFAHHYTHTPKDLQTLYLGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENND GKAYSGPGARAVADVLRGVRQADFPAKLVIPPGQSRMLLNHPIPVRNLAKPVNGRSSFLRLRSSDKIYTASLAMFAKKNT DGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTDNPQATTLTIPQVGKGISYPIV TLRGGRLGTGQSQTAKMLVRYPDTAYEAHGNYGVEYNLNLPLKNNTNQTQKVTITLETPLKEDKLSQGGVRFRKPSLDFP FFRGTVRLRYFDDQGKQKTRYVHLWHRTGQVLEPLVQLVMPPSSRRNVQVDVIYPPDSTPPQILTVRTSSINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52035; Mature: 51904
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTVFSPLLILVLGLTLTQTIGCANNPDDSVVAQTSTKPEPQIVVQPGEIRALPGKLDN CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCEEECCCCCCC IPVFNSNSPEWVKSEGILLSTFPTNGKKTPTAHLNFPFQGRFDLFAHHYTHTPKDLQTLY CEEECCCCCCEEECCCEEEEECCCCCCCCCEEEECCCCCCCHHEEEECCCCCCHHHEEEE LGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENNDGKAYSGPGARAVADVLRGV EEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEECCEEECCCCCEECCCCHHHHHHHHHHH RQADFPAKLVIPPGQSRMLLNHPIPVRNLAKPVNGRSSFLRLRSSDKIYTASLAMFAKKN HHCCCCEEEEECCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECC TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC NPQATTLTIPQVGKGISYPIVTLRGGRLGTGQSQTAKMLVRYPDTAYEAHGNYGVEYNLN CCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEECCCCCCEEEEEE LPLKNNTNQTQKVTITLETPLKEDKLSQGGVRFRKPSLDFPFFRGTVRLRYFDDQGKQKT ECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCE RYVHLWHRTGQVLEPLVQLVMPPSSRRNVQVDVIYPPDSTPPQILTVRTSSINN EEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC >Mature Secondary Structure PNTVFSPLLILVLGLTLTQTIGCANNPDDSVVAQTSTKPEPQIVVQPGEIRALPGKLDN CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCEEECCCCCCC IPVFNSNSPEWVKSEGILLSTFPTNGKKTPTAHLNFPFQGRFDLFAHHYTHTPKDLQTLY CEEECCCCCCEEECCCEEEEECCCCCCCCCEEEECCCCCCCHHEEEECCCCCCHHHEEEE LGVIVNNPGKKPVTVDVLQAASYLMQDAPFVTLPPYIENNDGKAYSGPGARAVADVLRGV EEEEEECCCCCCEEHHHHHHHHHHHHCCCEEEECCEEECCCCCEECCCCHHHHHHHHHHH RQADFPAKLVIPPGQSRMLLNHPIPVRNLAKPVNGRSSFLRLRSSDKIYTASLAMFAKKN HHCCCCEEEEECCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECC TDGSDRAPTMAEWQALLNNGNFAGPRDKTPTPPNATSGALIYGRVAGVSQGSQWQAILTD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC NPQATTLTIPQVGKGISYPIVTLRGGRLGTGQSQTAKMLVRYPDTAYEAHGNYGVEYNLN CCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEECCCCCCEEEEEE LPLKNNTNQTQKVTITLETPLKEDKLSQGGVRFRKPSLDFPFFRGTVRLRYFDDQGKQKT ECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCE RYVHLWHRTGQVLEPLVQLVMPPSSRRNVQVDVIYPPDSTPPQILTVRTSSINN EEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA