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The map label for this gene is perM [C]

Identifier: 75908944

GI number: 75908944

Start: 3371379

End: 3372416

Strand: Direct

Name: perM [C]

Synonym: Ava_2732

Alternate gene names: 75908944

Gene position: 3371379-3372416 (Clockwise)

Preceding gene: 75908943

Following gene: 75908945

Centisome position: 52.96

GC content: 36.51

Gene sequence:

>1038_bases
ATGAGCGGTATTGAAGCCAAAAACCTGTGGCATCGATTAAATAATTTGGCACTAGTCCGCTTTTTGCTGTTAGTTGCGGC
TGGTTGGGCTATCGTACAGCTTCTGGCTTACTTTGAGACAGTAATTGTCATTTTTACGTTTGCAGCTATTTTGGCTTTTT
TACTGAGCTACCCTGTACAATGGCTACGCCGTTTTCTCCCCCACAACATTGCAGTTGTTGTAATTTTCCTAATCAGCATA
GTGATTTTAGGAGGATTACTGATTACTGTCGGTATAGCAATTTTATCCCAGGGTCAACAATTAATTGACAGCATATCTGC
TTTCTTAACTTCTTTGTTACCTTTTTTGGAAAGAGTAGAGGGTTTATTACGTAACCGCAATCTACAAATAGATTTAAGTG
TAATTCAAGAACAATTGCGAACCCAAGCTGTATCAACACTAGTTACGAGTTTGGCAATTGTGCAACAATTTCTCACTAAT
TTTGTGACATTTATTTTAATTGCCGTCGTAGCTTTTTTCATGTTGCTAGACGGTGAAAAGCTTTGGAACTTTACTCTCAA
AATAATCCCGCAAAAACGCCGCATTAGATTTACAAATATTATGCGACGCAGTTTTCTAGGATTTTTTCGCGGTCAGTTAT
TATTGTGCTTATTCTTAACAAGTTCAACATTCATTATTTTCTTATTATTACAAGTACCTTTTGCTTTAATACTGTCCGTA
ATAGTGGGAATACTAGATATCATTCCCGGTATTGGAGCTACTCTAGGTGTGGGAACAATTACTTTAATTGTCTTATCTCA
AGATGTTTGGTTAGCATTAAAAGTATTAGTTGCTTGTGTAGTCCTCCAGCAAATTCAAGATAATTTAATTTCTCCTCGCA
TTATGCAAGGAGCGCTAAATCTCAATCCGGTAGTAGTATTTTTTGCTTTATTAGTAGGTGCTAGAGTCGCAGGGCTATTG
GGTGTTTTTATCTCTATCCCAATCACGGGAGTTATTGTATCTTTATTTGAAATTGATGAGATGAAATCTGAAGTTTAG

Upstream 100 bases:

>100_bases
TAAGTATCCACTGGGAAAAAATCTGCTGAAAGTAGGTAGCGATCGCTATTTTATTGTTGTATGTTGAAAATCAATTAATC
AACTTTTTTTTACACAGTAT

Downstream 100 bases:

>100_bases
TTATTAGTCAAGTCGCTTTTATTCAGTTCAAAATTTAAAAAAGGTCATTAGTTATTGATTTTTCCTTCTACCACGCCATA
CCTTTAATTCTCATCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQWLRRFLPHNIAVVVIFLISI
VILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVEGLLRNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTN
FVTFILIAVVAFFMLLDGEKLWNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIMQGALNLNPVVVFFALLVGARVAGLL
GVFISIPITGVIVSLFEIDEMKSEV

Sequences:

>Translated_345_residues
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQWLRRFLPHNIAVVVIFLISI
VILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVEGLLRNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTN
FVTFILIAVVAFFMLLDGEKLWNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIMQGALNLNPVVVFFALLVGARVAGLL
GVFISIPITGVIVSLFEIDEMKSEV
>Mature_344_residues
SGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQWLRRFLPHNIAVVVIFLISIV
ILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVEGLLRNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNF
VTFILIAVVAFFMLLDGEKLWNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSVI
VGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIMQGALNLNPVVVFFALLVGARVAGLLG
VFISIPITGVIVSLFEIDEMKSEV

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=340, Percent_Identity=25.5882352941176, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38282; Mature: 38151

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRRFLPHNIAVVVIFLISIVILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLLRNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAFFMLLDGEK
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LWNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIMQGALN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRRFLPHNIAVVVIFLISIVILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLLRNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAFFMLLDGEK
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LWNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIMQGALN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]