| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908907
Identifier: 75908907
GI number: 75908907
Start: 3332090
End: 3332569
Strand: Direct
Name: 75908907
Synonym: Ava_2695
Alternate gene names: NA
Gene position: 3332090-3332569 (Clockwise)
Preceding gene: 75908906
Following gene: 75908908
Centisome position: 52.34
GC content: 36.67
Gene sequence:
>480_bases ATGACTCCGGGTGCAAAAGCGAATCAGTCAGGCAGGATTTTAGAAACTAATGTAGAAGCAATACTAACTGCCTATGAGTA CTTTCAAATTGGCACTCATGTCACAAAAGAATATTTACTCAACGCTAGTTTATTAAAAAAACGCTACGCTAAACAGGTTT ATATTGGTAACGGAGTATATCAAACATCACTAAAAGTTGATTTTTATGTTGTGGGCTTGCCTCTCAATCCATCAGAATTA ATTATTGAGTGTAAATGGCAAGAAAGTGGTGGCTCCGTTGATGAAAAGTTTCCTTATTTAAATTTGAATATTCAACAATA TTACCCAGCACCGACAATTGTCGTGATTGGTGGTGAAGGGATGAGAGAAGGGGCGATTCAGTGGTTAAGGCAACAAGTAA ATTTTAACCATAATCTCCTAGCAGTACATACACTAGATAGATTTATTGCCTGGGCTAATAAAACTTTTGGCGTTGCATAA
Upstream 100 bases:
>100_bases AATCTCAATTGAAAATTCATATTAAGTAATCGATCATTTGCGACTGGTTCCATGAAATCCTGAAATGAGCATGGTTGATG CAAAATGATGGGTGATAAAC
Downstream 100 bases:
>100_bases TACAGAAATGCACGAAGCCATTATCTTGCGCGCCAGAAAAACTTTATTCCCCATTGTTAAAATCTTGTTATCCTCGGTAA ACACCCACGCAGAACGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Site-Specific DNA Methylase
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTPGAKANQSGRILETNVEAILTAYEYFQIGTHVTKEYLLNASLLKKRYAKQVYIGNGVYQTSLKVDFYVVGLPLNPSEL IIECKWQESGGSVDEKFPYLNLNIQQYYPAPTIVVIGGEGMREGAIQWLRQQVNFNHNLLAVHTLDRFIAWANKTFGVA
Sequences:
>Translated_159_residues MTPGAKANQSGRILETNVEAILTAYEYFQIGTHVTKEYLLNASLLKKRYAKQVYIGNGVYQTSLKVDFYVVGLPLNPSEL IIECKWQESGGSVDEKFPYLNLNIQQYYPAPTIVVIGGEGMREGAIQWLRQQVNFNHNLLAVHTLDRFIAWANKTFGVA >Mature_158_residues TPGAKANQSGRILETNVEAILTAYEYFQIGTHVTKEYLLNASLLKKRYAKQVYIGNGVYQTSLKVDFYVVGLPLNPSELI IECKWQESGGSVDEKFPYLNLNIQQYYPAPTIVVIGGEGMREGAIQWLRQQVNFNHNLLAVHTLDRFIAWANKTFGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17930; Mature: 17799
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGAKANQSGRILETNVEAILTAYEYFQIGTHVTKEYLLNASLLKKRYAKQVYIGNGVY CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEE QTSLKVDFYVVGLPLNPSELIIECKWQESGGSVDEKFPYLNLNIQQYYPAPTIVVIGGEG EEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHEECCCCEEEEECCCC MREGAIQWLRQQVNFNHNLLAVHTLDRFIAWANKTFGVA CHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCC >Mature Secondary Structure TPGAKANQSGRILETNVEAILTAYEYFQIGTHVTKEYLLNASLLKKRYAKQVYIGNGVY CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEE QTSLKVDFYVVGLPLNPSELIIECKWQESGGSVDEKFPYLNLNIQQYYPAPTIVVIGGEG EEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHEECCCCEEEEECCCC MREGAIQWLRQQVNFNHNLLAVHTLDRFIAWANKTFGVA CHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA