| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is menA [H]
Identifier: 75908846
GI number: 75908846
Start: 3258945
End: 3259850
Strand: Direct
Name: menA [H]
Synonym: Ava_2633
Alternate gene names: 75908846
Gene position: 3258945-3259850 (Clockwise)
Preceding gene: 75908844
Following gene: 75908847
Centisome position: 51.2
GC content: 41.61
Gene sequence:
>906_bases ATGACTACAAAGCAAATTTCTCATACTAAAATTAAGCTATGGATGGCGGCGATCAAACCGCCGATGTATAGTGTTGCCAT CATGCCTATTTGGGTAGGAAGCGCAGTTGCATTTGCTGAAAATAAAGTTTTTAATTTAGCAGTATTTTCTACTTTTATTT TTGCAGCAATTTTAATTCTGGCTTGGGAAAATATCAGTAATGATGTATTCGATTCAGAAACAGGAATTGATGTAAATAAA CATCATTCTTTAGTAAATTTAACTGGCAAGAAGGCTTTGGTGTTTTGGTTAGGAAACTTGTGTTTAGTTTCTGGACTATC GGGGATATTAGCGATCGCCACTTGGCAACAAGACCCCACAGTTATCGGTATCATCTTGTTATGCTGTGGTTTGGGCTATA TGTACCAAGGCCCTCCCTTTCGTTTAGGATACCAAGGTTTAGGGGAAATTCTGTGCTTTTTTGCCTTCGGGCCTTTAGGA GTGTCAGCAGGATACTATAGCCAAACCCAAACTTGGTCAATCACAAGTTTAGCCGCCTCCGTCATTGTCGGGATTGTCAC CAGCTTAATTTTATTTTGCTCCCACTTCCACCAAGTTGATGATGACATTAAAGCAGGTAAGCGATCGCCCATTGTTCGTT TAGGTACAGCCAACGGTGCAAAAGTTCTCACTTGGTTTACAGCCAGCATTTACCCCTTTAGCTTGCTGTTTGTAATTTTG GGATTCTTCCCTGTGTGGACGCTGTTAAGCTGGCTAAGTCTACCTTACGCCTTCAAATTATGTCGCCACGTCCAGCAAAA CCACAACCAACCAGAAAAAGTCAGCAATTGTAAATTCATTGCCGTAGCGGTGCATTTCTGGAGTTGCTTACTGTTGGGTT TGGGGTTTGTCATTGCAGGCGTTTAA
Upstream 100 bases:
>100_bases AGAGATACTTCCAAAAAAGATAGTAGCTTTATTTAACCTGTACTCTACTAGCTAGAGGTATTGTTTGTAATTTTCAATTT TGAATTGTTTACCACAACTG
Downstream 100 bases:
>100_bases CGTGAGTTCGACGGAACCTAACCCCAACCCCTTCCCTTGTAGGATACTGTTGGCGAATTATTGAGGGGTTAAGCCCCTCA AGAGTTTGGAACAGTGGAAA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTKQISHTKIKLWMAAIKPPMYSVAIMPIWVGSAVAFAENKVFNLAVFSTFIFAAILILAWENISNDVFDSETGIDVNK HHSLVNLTGKKALVFWLGNLCLVSGLSGILAIATWQQDPTVIGIILLCCGLGYMYQGPPFRLGYQGLGEILCFFAFGPLG VSAGYYSQTQTWSITSLAASVIVGIVTSLILFCSHFHQVDDDIKAGKRSPIVRLGTANGAKVLTWFTASIYPFSLLFVIL GFFPVWTLLSWLSLPYAFKLCRHVQQNHNQPEKVSNCKFIAVAVHFWSCLLLGLGFVIAGV
Sequences:
>Translated_301_residues MTTKQISHTKIKLWMAAIKPPMYSVAIMPIWVGSAVAFAENKVFNLAVFSTFIFAAILILAWENISNDVFDSETGIDVNK HHSLVNLTGKKALVFWLGNLCLVSGLSGILAIATWQQDPTVIGIILLCCGLGYMYQGPPFRLGYQGLGEILCFFAFGPLG VSAGYYSQTQTWSITSLAASVIVGIVTSLILFCSHFHQVDDDIKAGKRSPIVRLGTANGAKVLTWFTASIYPFSLLFVIL GFFPVWTLLSWLSLPYAFKLCRHVQQNHNQPEKVSNCKFIAVAVHFWSCLLLGLGFVIAGV >Mature_300_residues TTKQISHTKIKLWMAAIKPPMYSVAIMPIWVGSAVAFAENKVFNLAVFSTFIFAAILILAWENISNDVFDSETGIDVNKH HSLVNLTGKKALVFWLGNLCLVSGLSGILAIATWQQDPTVIGIILLCCGLGYMYQGPPFRLGYQGLGEILCFFAFGPLGV SAGYYSQTQTWSITSLAASVIVGIVTSLILFCSHFHQVDDDIKAGKRSPIVRLGTANGAKVLTWFTASIYPFSLLFVILG FFPVWTLLSWLSLPYAFKLCRHVQQNHNQPEKVSNCKFIAVAVHFWSCLLLGLGFVIAGV
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Escherichia coli, GI1790365, Length=288, Percent_Identity=26.0416666666667, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI17737429, Length=289, Percent_Identity=25.6055363321799, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011937 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33062; Mature: 32931
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKQISHTKIKLWMAAIKPPMYSVAIMPIWVGSAVAFAENKVFNLAVFSTFIFAAILIL CCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH AWENISNDVFDSETGIDVNKHHSLVNLTGKKALVFWLGNLCLVSGLSGILAIATWQQDPT HHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCH VIGIILLCCGLGYMYQGPPFRLGYQGLGEILCFFAFGPLGVSAGYYSQTQTWSITSLAAS HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VIVGIVTSLILFCSHFHQVDDDIKAGKRSPIVRLGTANGAKVLTWFTASIYPFSLLFVIL HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHH GFFPVWTLLSWLSLPYAFKLCRHVQQNHNQPEKVSNCKFIAVAVHFWSCLLLGLGFVIAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure TTKQISHTKIKLWMAAIKPPMYSVAIMPIWVGSAVAFAENKVFNLAVFSTFIFAAILIL CCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH AWENISNDVFDSETGIDVNKHHSLVNLTGKKALVFWLGNLCLVSGLSGILAIATWQQDPT HHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCH VIGIILLCCGLGYMYQGPPFRLGYQGLGEILCFFAFGPLGVSAGYYSQTQTWSITSLAAS HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VIVGIVTSLILFCSHFHQVDDDIKAGKRSPIVRLGTANGAKVLTWFTASIYPFSLLFVIL HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHH GFFPVWTLLSWLSLPYAFKLCRHVQQNHNQPEKVSNCKFIAVAVHFWSCLLLGLGFVIAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]