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The map label for this gene is glgA

Identifier: 75908844

GI number: 75908844

Start: 3255569

End: 3257047

Strand: Direct

Name: glgA

Synonym: Ava_2631

Alternate gene names: 75908844

Gene position: 3255569-3257047 (Clockwise)

Preceding gene: 75908843

Following gene: 75908846

Centisome position: 51.14

GC content: 40.3

Gene sequence:

>1479_bases
ATGTACATTGTACAGATTGCCTCGGAATGCGCTCCTGTAATTAAGGCAGGGGGTTTGGGGGATGTTGTCTATGGATTGAG
TCGGGAATTAGAGATTCGGGGCAATTGCGTCGAACTAATTCTGCCCAAGTATGATTGTATGCGCTACGACCATATTTGGG
GATTACATGAGGCTTATTTAAACCTGTGGGTTCCCTGGTTTGGTGCAGCAATTCACTGTACTGTTTACTGCGGTTGGGTA
CATGGACGGGTGTGTTTCTTCATTGAACCCCATTCCGAGGACAATTTCTTTAATCGGGGTTGCTATTACGGTTGTGATGA
TGATGATATGCGCTTTGCCTTCTTTAGCAAAGCCGCTTTAGAATTTCTCCATCAAAGCAATAAGCGTCCTGATATTATCC
ATTGTCATGATTGGCAAACAGGCTTAGTTCCTGTGATGCTCTATGAGATTTACAAGTATCATGGTATGGACACTCAAAGG
GTTTGCTACACCATCCACAACTTTAAACATCAAGGAATTGGTGGTGTCAAAACTCTCTGGGCGACAGGGTTAAACAGAGA
AGCTTATTACTTCCAAAATGATAAGTTACAGGATGACTTTAACCCCTTTGCCTTAAATTACATGAAAGGCGGTATAGTCT
ACTCCAATGCTGTTACCACAGTTTCACCAAACCACGCTTTAGAAGCACAATATACTGATGTTGGTTGTGGCTTAGGTCAT
ACTTTGTATCAACACAAAGATAAATTTAGTGGGATTCTCAACGGTATTGATTACGATTTCTGGAACCCAGAAATTGATCG
TTACATCCCCTACAACTACAACCAAGAAGACTTTGAACAAAAACTATATAACAAAAAAGCTTTACGCGAGCGCTTGTTGC
TGCAAGCTGCTGATAAACCAATCATTGCTTACATTGGGCGTTTAGATAATCAAAAAGGTGTACATCTTGTCCACCACGCC
ATTTATCATTCCTTGAATAAAGGAGCGCAATTTGTATTATTGGGTTCAGCAACAGAAGCAGGAATCAATGCTCATTTCCG
GCATGAAAAACAGTTTTTAAATAACAATCCTGATGTCCATTTAGAATTGGGCTTTAACGAAGAATTGTCCCATTTGATTT
ACGCCGGGGCTGATATGATTGTTGTTCCCAGCAATTATGAACCCTGCGGCTTAACACAAATGATTGGTTTGAAGTATGGT
ACTGTTCCCATTGTGCGCGGTGTTGGTGGGTTAGTAAACACGGTATTTGACCGAGATTATGACCAAAATTTACCACCAGA
AAAACGCAATGGTTACGTATTTTATCAATCTGATAACCAAGCTTTAGAATCAGCAATGAATCGGGCAATTGATTTGTGGT
ATCAGTCTCCTGAAAAATTCCAACAATTGGCAATTCAGGGCATGAAATATGACTACTCATGGAATAATCCAGGCAAGGAA
TATTTAGATATTTACGAATGGATTAAGTACAAATGGTAG

Upstream 100 bases:

>100_bases
AATCTCCGGCTAACATTCCCTTAGTCACTTGTCAATGAGTACATATTTCATGTACTCACTAGTATAGTAAAGATAAATTT
TTGTGAAGCGAGGACTACGG

Downstream 100 bases:

>100_bases
ATGAATAATTTGTAATTCAAGTAGGGTGGGCAATGCCCACCTTTTGATTTTTTTTGTAGGAGTTGCCCAGTTTTGAGAAT
GTTAGGTTCCGTTCCTCCAC

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase 1

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHIWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLVPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKE
YLDIYEWIKYKW

Sequences:

>Translated_492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHIWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLVPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKE
YLDIYEWIKYKW
>Mature_492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHIWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLVPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKE
YLDIYEWIKYKW

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=504, Percent_Identity=31.7460317460317, Blast_Score=230, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA1_ANAVT (Q3M9U1)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_323140.1
- ProteinModelPortal:   Q3M9U1
- SMR:   Q3M9U1
- STRING:   Q3M9U1
- GeneID:   3681914
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_2631
- NMPDR:   fig|240292.3.peg.596
- eggNOG:   COG0297
- HOGENOM:   HBG596384
- OMA:   MRYDYSW
- PhylomeDB:   Q3M9U1
- ProtClustDB:   PRK00654
- BioCyc:   AVAR240292:AVA_2631-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 56912; Mature: 56912

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHIWGLHEAYL
CEEEEEHHHHHHHHHCCCCHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
NLWVPWFGAAIHCTVYCGWVHGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAAL
HHHHHHHCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
EFLHQSNKRPDIIHCHDWQTGLVPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH
ATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
HCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEECEEEEECCCCCEEEEECCCCCCCCH
TLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAADKP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVH
CEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
LELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTVFDRDY
EEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCHH
YLDIYEWIKYKW
HHHHHHHHHCCC
>Mature Secondary Structure
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHIWGLHEAYL
CEEEEEHHHHHHHHHCCCCHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
NLWVPWFGAAIHCTVYCGWVHGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAAL
HHHHHHHCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
EFLHQSNKRPDIIHCHDWQTGLVPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH
ATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
HCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEECEEEEECCCCCEEEEECCCCCCCCH
TLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAADKP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGSATEAGINAHFRHEKQFLNNNPDVH
CEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
LELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTVFDRDY
EEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCHH
YLDIYEWIKYKW
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA