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The map label for this gene is ychA [C]

Identifier: 75908837

GI number: 75908837

Start: 3246478

End: 3247293

Strand: Direct

Name: ychA [C]

Synonym: Ava_2624

Alternate gene names: 75908837

Gene position: 3246478-3247293 (Clockwise)

Preceding gene: 75908836

Following gene: 75908842

Centisome position: 51.0

GC content: 41.79

Gene sequence:

>816_bases
ATGAATTTCTCCTCAGCACGACAATATTTTTATCAAGAGATTCAGCAATCTGAGGCGGATATTGACCTAGCTAGGGCAGC
TTTGTATATTGCTAAGGAAGAATATCCTAGACTGGATGTAGAGGAATATCTAAGCGCACTCGATACAATGGCAATGGAAG
TTGAGGAACGCTTGCCATCTTCACGGTATCCGTTACGGGTGATTCAAGGTATTAATCAGTATTTGTATGACGATTTAGGA
TTTATAGGGAATCAGAAAGATTATTACGACCCACGCAATAGTTTCTTCAATGAGGTAATTGACCGTCGAGTGGGTATTCC
GATTACTTTAGCTTTAGTTTATCTGGAGATTGCCCAAAGGATTGATTTTCCAATGGAGGGGGTGGGATTACCGGGACATT
TCCTCATCCGTCCAGCTATCTCTGATATGGAGATTTTTGTGGATGCGTTTAATCGTGGTGAGGTGATGTTTGCCCAAGAT
TGCCAAGACAAGCTAAATCAAATGTTTAAGGAATCGGTGAATTTGCGCCCGGAATTTTTGGCTAGAGTTAGCAAGCGGCA
GTTTTTGGCAAGGATGTTGACGAACCTAAAATATATTTACCTGAGACAGCAGCAATTAGAAAAAAGCTTAGGTGTCGTTG
AGAGAATTTTATTATTGTTTCCTGAGGCAACTTCAGAATTGCGCGATCGCGGTTTACTCTACTACCAACTAGGTTACTAT
CCTCAAGCTACCAATGACCTAGAAACCTACCTAGCAAATGTTCCCAACGCCGAAGATGCGGTAACTATCAAGCGGTTATT
GGGAGAGATGAAGTGA

Upstream 100 bases:

>100_bases
TCTCTGTGTCTATTTTGAGAGGAGTTTTGAAACGCGGAGGGGCGCGGAGGCTAGCGCAGAGGGACGCAGAGGTTTAACTT
AATTAAGTGAGGCTTGGTTT

Downstream 100 bases:

>100_bases
CTATTGACTATTGACTTTCCGCTACCCGTTTGAGGCGGCGGAGTTGCGCCTGCATATCTTGTTTTGTCCAGACGGCGGCG
AAGGTGTTGAAGCCCCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNFSSARQYFYQEIQQSEADIDLARAALYIAKEEYPRLDVEEYLSALDTMAMEVEERLPSSRYPLRVIQGINQYLYDDLG
FIGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPEATSELRDRGLLYYQLGYY
PQATNDLETYLANVPNAEDAVTIKRLLGEMK

Sequences:

>Translated_271_residues
MNFSSARQYFYQEIQQSEADIDLARAALYIAKEEYPRLDVEEYLSALDTMAMEVEERLPSSRYPLRVIQGINQYLYDDLG
FIGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPEATSELRDRGLLYYQLGYY
PQATNDLETYLANVPNAEDAVTIKRLLGEMK
>Mature_271_residues
MNFSSARQYFYQEIQQSEADIDLARAALYIAKEEYPRLDVEEYLSALDTMAMEVEERLPSSRYPLRVIQGINQYLYDDLG
FIGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQRIDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQD
CQDKLNQMFKESVNLRPEFLARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPEATSELRDRGLLYYQLGYY
PQATNDLETYLANVPNAEDAVTIKRLLGEMK

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=261, Percent_Identity=29.1187739463602, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI16306502, Length=243, Percent_Identity=29.6296296296296, Blast_Score=98, Evalue=9e-21,
Organism=Escherichia coli, GI1787465, Length=233, Percent_Identity=28.3261802575107, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31627; Mature: 31627

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSSARQYFYQEIQQSEADIDLARAALYIAKEEYPRLDVEEYLSALDTMAMEVEERLPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SRYPLRVIQGINQYLYDDLGFIGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQDCQDKLNQMFKESVNLRPEFL
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHH
ARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPEATSELRDRGLLYYQLGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCC
PQATNDLETYLANVPNAEDAVTIKRLLGEMK
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFSSARQYFYQEIQQSEADIDLARAALYIAKEEYPRLDVEEYLSALDTMAMEVEERLPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SRYPLRVIQGINQYLYDDLGFIGNQKDYYDPRNSFFNEVIDRRVGIPITLALVYLEIAQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDFPMEGVGLPGHFLIRPAISDMEIFVDAFNRGEVMFAQDCQDKLNQMFKESVNLRPEFL
CCCCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHH
ARVSKRQFLARMLTNLKYIYLRQQQLEKSLGVVERILLLFPEATSELRDRGLLYYQLGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCC
PQATNDLETYLANVPNAEDAVTIKRLLGEMK
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]