Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 75908765

GI number: 75908765

Start: 3153253

End: 3153885

Strand: Direct

Name: nusG [H]

Synonym: Ava_2551

Alternate gene names: 75908765

Gene position: 3153253-3153885 (Clockwise)

Preceding gene: 75908764

Following gene: 75908766

Centisome position: 49.53

GC content: 45.02

Gene sequence:

>633_bases
ATGACTTCTGCGACAGACGAACCAACAAACTCGGCGTTGCAGTCAGAGGAAACAGCAGAAACAGCACTTACAGAAGCACG
CTGGTATGCAGTACAAGTAGCCTCAGGCTGCGAAAAGCGGGTAAAAACAAATTTAGAGCAGCGCATTCAAACTTTTGATG
TGGCGGAAAAAATTGTCCAGGTAGAAATTCCCCACACACCAGCAGTCAAAATCCGTAAGGATGGCAGCCGCCAACACACA
GAAGAGAAAGTATTTCCTGGCTATGTGTTAGTGCGGATGGTGATGGATGATGATACCTGGCAGGTGGTACGTAATACATC
CCATGTAATTAACTTTGTGGGAGCAGAACAAAAACGTGGTACAGGCAAAGGCCGCGGTCACGTTAAACCACTACCCCTAA
GTCACTCAGAAGTAGAACGTATCTTTAAACAAACCACAGAACAAGAGCCAATTGTCAAAATTGACATGGCTAGTGGTGAT
AAGATAATCGTGCTTTCTGGCCCATTCAAGGACTTTGAAGGTGAGGTAATTGAGGTTAGTCCAGAACGGAGTAAACTAAA
AGCCTTGCTATCGATCTTCGGGCGAGACACACCAGTAGAACTGGAATTTAATCAGGTAGAAAAACAGAGCTAA

Upstream 100 bases:

>100_bases
TAAGTGAATCAGCAGCCGTGTTGCTTATGGTGACACTCTCCGCTTCCCTAATCTACTTAGTCGATGGATTGTTTGCTTGG
GTAGCAAAGCAGGTATTCTG

Downstream 100 bases:

>100_bases
ATAAAAAATGGCGAAGAAAGTAGTAGCGGTCATTAAATTGGCCCTGAATGCTGGAAAAGCCAACCCAGCACCCCCAGTTG
GTCCCGCCTTGGGTCAACAT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTSATDEPTNSALQSEETAETALTEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIVQVEIPHTPAVKIRKDGSRQHT
EEKVFPGYVLVRMVMDDDTWQVVRNTSHVINFVGAEQKRGTGKGRGHVKPLPLSHSEVERIFKQTTEQEPIVKIDMASGD
KIIVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVEKQS

Sequences:

>Translated_210_residues
MTSATDEPTNSALQSEETAETALTEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIVQVEIPHTPAVKIRKDGSRQHT
EEKVFPGYVLVRMVMDDDTWQVVRNTSHVINFVGAEQKRGTGKGRGHVKPLPLSHSEVERIFKQTTEQEPIVKIDMASGD
KIIVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVEKQS
>Mature_209_residues
TSATDEPTNSALQSEETAETALTEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIVQVEIPHTPAVKIRKDGSRQHTE
EKVFPGYVLVRMVMDDDTWQVVRNTSHVINFVGAEQKRGTGKGRGHVKPLPLSHSEVERIFKQTTEQEPIVKIDMASGDK
IIVLSGPFKDFEGEVIEVSPERSKLKALLSIFGRDTPVELEFNQVEKQS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=184, Percent_Identity=42.9347826086957, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 23590; Mature: 23459

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATDEPTNSALQSEETAETALTEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIVQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VEIPHTPAVKIRKDGSRQHTEEKVFPGYVLVRMVMDDDTWQVVRNTSHVINFVGAEQKRG
EECCCCCCEEEECCCCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
TGKGRGHVKPLPLSHSEVERIFKQTTEQEPIVKIDMASGDKIIVLSGPFKDFEGEVIEVS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEC
PERSKLKALLSIFGRDTPVELEFNQVEKQS
CCHHHHHHHHHHHCCCCCEEEEHHCCCCCC
>Mature Secondary Structure 
TSATDEPTNSALQSEETAETALTEARWYAVQVASGCEKRVKTNLEQRIQTFDVAEKIVQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VEIPHTPAVKIRKDGSRQHTEEKVFPGYVLVRMVMDDDTWQVVRNTSHVINFVGAEQKRG
EECCCCCCEEEECCCCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
TGKGRGHVKPLPLSHSEVERIFKQTTEQEPIVKIDMASGDKIIVLSGPFKDFEGEVIEVS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEC
PERSKLKALLSIFGRDTPVELEFNQVEKQS
CCHHHHHHHHHHHCCCCCEEEEHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]