Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 75908757

GI number: 75908757

Start: 3143388

End: 3144803

Strand: Direct

Name: ybhG [C]

Synonym: Ava_2543

Alternate gene names: 75908757

Gene position: 3143388-3144803 (Clockwise)

Preceding gene: 75908755

Following gene: 75908758

Centisome position: 49.38

GC content: 46.33

Gene sequence:

>1416_bases
ATGAAACAGCAAACTTACCCAGCGACAAGCCAGTTAATAAATACAAAATTACAATTTAGCGGTGAAATATCTGCCCACAG
ACAGATATTTCCTGACTGGCAATGTGCAAAACATAGCTTATTTGTTGCTTGTTTGTTGAGTGTGGGTGTACTAACAGCAA
GTTGCGGTTCTTTACCCAAAGAAACAGCCGAAGCCCAATCTCAGCAACGTAGAGGTGGAGAACGAGGTGGGGTAGCACCT
GTAGATGTGGCGATCGCCCGTAGAGAGAGGCTAGAGACACAACCAGAGTATACAGGTACAACCACACCATTTAGAACAAT
ATCGTTGCGATCGCAGGTAGAAGCCAGACTCTTAGCTTTGAACTTAGATGTAGGTGACACAGTTAGACGAGGGCAGAACG
TCGGACAACTAGATGACATCATATTATCCACAGACCTCAAGCAAGCAGAAGCCGAACTCGCAGCTTTGGAATCAGAAGTA
GCTAGAGCGACAACCCAGGTAAGTAATGCCCGCACCCAAGTGGAACGGGCAAGACTCGAAGTAGTACAGGCTGAAGCAGA
TGCCCAACGTCAAGAGAGATTATTTAAAGAAGGAGCTATATCCGAGCAAGCCGCCGAGCAAGCACGGACACAAGCAAAAA
CAGCTACTCAAGCACTCCGCGCAGCTACTGAGCAAGTCCGAACCGAAGAACAAGCAGTTGCGGCTGCCAAAGGTAGAGTA
TTTGCCCAAAAAGCCGTAGTTGCCCAAACAAAAGAACGCCGCTCATATACACGCCTCACATCCCCCCTTAATGGTGTGAT
CACCGAGAGAGTCACAGAGCCAGGTAATCTCTTACAAGCTGGAGGAGAAGTTTTAAAAATTGCTGACTTGAGCCAAATTA
AAGTAGTAGTGCAAGTCTCCGAATTAGAACTAGGACAAATTCAAGTCGGACAATCTGTACAAGTACGCTTAGATGCCTTC
CCAGACCGAGAAATCACTGGTAGAGTCACCCGTATTTCCCCCACCGCCGATGCTACAGCTCGTTTAATACCAGTAGAAGT
AGTAATTCCTAATAGTCAAGGCAATATTGGTAGTGGATTGCTAGCAAGAGTTAACTTTGCCAGTCAAACTCCAGAACGAG
TGGTAGTCTCACAAACAGCCATTCAAAGGGAAGGCAGAAACCAGCAATCCGCCCCAAAAACCCCAAGACAATCACAAAAT
CAAAACGGCACACTGTACGTAGTTACGGATAGCCAAGGCAAGCCAACTGTCACAGCCCGTACAGTCACTTTAGGAAAAAG
TGCTGATGGCAAAGTAGAAATTTTATCTGGCTTACAACCTGGAGAGCAATACGTCGCACGTAGTGGTAGACCCTTAAAAG
ATGGGGAAAATGTACGTCTTTCAATTCTTTCAGAGCGAAACCCTGCGAGGAATTAA

Upstream 100 bases:

>100_bases
GTACATGATTGCTAGGTAAAAAAGGCTGTTATTTTAAAAGCTTCCACAAACAAGGAAACAAACCATAAATGATTTTCAAC
CAAAATCCACAGCAAAAATC

Downstream 100 bases:

>100_bases
AAATTCAAAGTAAAGATTTAGGTTGGGAATTTTTAATTTTGCGGAAAGTTGCGGTGCAGGGGTTCCCCCCGTTGAGCAAA
CTTTCCAAGACGAATTTTGA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKQQTYPATSQLINTKLQFSGEISAHRQIFPDWQCAKHSLFVACLLSVGVLTASCGSLPKETAEAQSQQRRGGERGGVAP
VDVAIARRERLETQPEYTGTTTPFRTISLRSQVEARLLALNLDVGDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEV
ARATTQVSNARTQVERARLEVVQAEADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRV
FAQKAVVAQTKERRSYTRLTSPLNGVITERVTEPGNLLQAGGEVLKIADLSQIKVVVQVSELELGQIQVGQSVQVRLDAF
PDREITGRVTRISPTADATARLIPVEVVIPNSQGNIGSGLLARVNFASQTPERVVVSQTAIQREGRNQQSAPKTPRQSQN
QNGTLYVVTDSQGKPTVTARTVTLGKSADGKVEILSGLQPGEQYVARSGRPLKDGENVRLSILSERNPARN

Sequences:

>Translated_471_residues
MKQQTYPATSQLINTKLQFSGEISAHRQIFPDWQCAKHSLFVACLLSVGVLTASCGSLPKETAEAQSQQRRGGERGGVAP
VDVAIARRERLETQPEYTGTTTPFRTISLRSQVEARLLALNLDVGDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEV
ARATTQVSNARTQVERARLEVVQAEADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRV
FAQKAVVAQTKERRSYTRLTSPLNGVITERVTEPGNLLQAGGEVLKIADLSQIKVVVQVSELELGQIQVGQSVQVRLDAF
PDREITGRVTRISPTADATARLIPVEVVIPNSQGNIGSGLLARVNFASQTPERVVVSQTAIQREGRNQQSAPKTPRQSQN
QNGTLYVVTDSQGKPTVTARTVTLGKSADGKVEILSGLQPGEQYVARSGRPLKDGENVRLSILSERNPARN
>Mature_471_residues
MKQQTYPATSQLINTKLQFSGEISAHRQIFPDWQCAKHSLFVACLLSVGVLTASCGSLPKETAEAQSQQRRGGERGGVAP
VDVAIARRERLETQPEYTGTTTPFRTISLRSQVEARLLALNLDVGDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEV
ARATTQVSNARTQVERARLEVVQAEADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRV
FAQKAVVAQTKERRSYTRLTSPLNGVITERVTEPGNLLQAGGEVLKIADLSQIKVVVQVSELELGQIQVGQSVQVRLDAF
PDREITGRVTRISPTADATARLIPVEVVIPNSQGNIGSGLLARVNFASQTPERVVVSQTAIQREGRNQQSAPKTPRQSQN
QNGTLYVVTDSQGKPTVTARTVTLGKSADGKVEILSGLQPGEQYVARSGRPLKDGENVRLSILSERNPARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=250, Percent_Identity=28.8, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081796, Length=360, Percent_Identity=22.7777777777778, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790519, Length=305, Percent_Identity=23.6065573770492, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789900, Length=251, Percent_Identity=29.0836653386454, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 51050; Mature: 51050

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQTYPATSQLINTKLQFSGEISAHRQIFPDWQCAKHSLFVACLLSVGVLTASCGSLPK
CCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ETAEAQSQQRRGGERGGVAPVDVAIARRERLETQPEYTGTTTPFRTISLRSQVEARLLAL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCEEEEEE
NLDVGDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEVARATTQVSNARTQVERARLE
ECCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQAEADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
FAQKAVVAQTKERRSYTRLTSPLNGVITERVTEPGNLLQAGGEVLKIADLSQIKVVVQVS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCEEEEECCCCEEEEEEEE
ELELGQIQVGQSVQVRLDAFPDREITGRVTRISPTADATARLIPVEVVIPNSQGNIGSGL
CCCCCEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC
LARVNFASQTPERVVVSQTAIQREGRNQQSAPKTPRQSQNQNGTLYVVTDSQGKPTVTAR
EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE
TVTLGKSADGKVEILSGLQPGEQYVARSGRPLKDGENVRLSILSERNPARN
EEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKQQTYPATSQLINTKLQFSGEISAHRQIFPDWQCAKHSLFVACLLSVGVLTASCGSLPK
CCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ETAEAQSQQRRGGERGGVAPVDVAIARRERLETQPEYTGTTTPFRTISLRSQVEARLLAL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCEEEEEE
NLDVGDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEVARATTQVSNARTQVERARLE
ECCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQAEADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
FAQKAVVAQTKERRSYTRLTSPLNGVITERVTEPGNLLQAGGEVLKIADLSQIKVVVQVS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCEEEEECCCCEEEEEEEE
ELELGQIQVGQSVQVRLDAFPDREITGRVTRISPTADATARLIPVEVVIPNSQGNIGSGL
CCCCCEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC
LARVNFASQTPERVVVSQTAIQREGRNQQSAPKTPRQSQNQNGTLYVVTDSQGKPTVTAR
EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE
TVTLGKSADGKVEILSGLQPGEQYVARSGRPLKDGENVRLSILSERNPARN
EEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA