| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is folE [H]
Identifier: 75908751
GI number: 75908751
Start: 3137698
End: 3138405
Strand: Direct
Name: folE [H]
Synonym: Ava_2537
Alternate gene names: 75908751
Gene position: 3137698-3138405 (Clockwise)
Preceding gene: 75908750
Following gene: 75908753
Centisome position: 49.29
GC content: 45.62
Gene sequence:
>708_bases ATGACTATTGCTAGTTCCAACGGTTCCAATCGCGCTCAATCGCCCCTAATTCCCGACTTGGCAGAAGCTATTAATACCAG ACCTGACCGCAATACCCATAACGGCCGAGAACCAGAATTGCACCAACCTTCAGAACAAGACATGGATTCAATGATGGATG CAGTCAGGTCAATATTAGTGGGTGTTGGAGAAGACCCAGAAAGAGAAGGTCTATTAAAAACACCAAAGCGCGTGGCAGAA GCGATGCGGTTCCTGACCAGTGGCTACAACCAATCTTTAGAAGAATTACTCAACGGTGCTGTCTTTGATGAAGGTCATAA CGAGATGGTACTAGTGCGAGATATCAACTTCTTTAGCTTATGCGAACACCATATGTTACCCTTCATGGGTAGAGCGCACG TTGCTTATATCCCCAACCAGAAGGTAGTAGGACTAAGTAAGCTAGCCCGGATTGTTGAGATGTATTCCCGGCGCTTGCAA GTACAAGAAAGGCTAACCCGCCAAATAGCTGAAGCTGTGCAGACCATTTTAGAACCCCAAGGTGTAGCGGTTGTGATGGA AGCCAGCCATATGTGCATGGTGATGCGTGGTGTACAAAAACCAGGCTCTTGGACTGTAACTAGCGCCATGTTAGGCGTAT TCCAAGAAGAACAAAAAACTAGAGAAGAATTCTTTAACTTGATTCGTCATCAACCATCATTCTTTTAG
Upstream 100 bases:
>100_bases AGCTAACTCCTACGTAGTTTGTAGGATTATTTTGAATTCTGAATTTTGAATTCCCCTTATGGGGTTAACCATTGAATAAA CCATAACCAAGACTGAAATT
Downstream 100 bases:
>100_bases GGAATGGGGAGTGGGGAATGGGGAATATCCCTTCTTCCACTCCCTAATTCCTACTCCCCAATTTTTCAAAAAGTAGTGCA ACTTTATCTAAATCTTTGTC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I 1; GTP-CH-I 1 [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTIASSNGSNRAQSPLIPDLAEAINTRPDRNTHNGREPELHQPSEQDMDSMMDAVRSILVGVGEDPEREGLLKTPKRVAE AMRFLTSGYNQSLEELLNGAVFDEGHNEMVLVRDINFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQ VQERLTRQIAEAVQTILEPQGVAVVMEASHMCMVMRGVQKPGSWTVTSAMLGVFQEEQKTREEFFNLIRHQPSFF
Sequences:
>Translated_235_residues MTIASSNGSNRAQSPLIPDLAEAINTRPDRNTHNGREPELHQPSEQDMDSMMDAVRSILVGVGEDPEREGLLKTPKRVAE AMRFLTSGYNQSLEELLNGAVFDEGHNEMVLVRDINFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQ VQERLTRQIAEAVQTILEPQGVAVVMEASHMCMVMRGVQKPGSWTVTSAMLGVFQEEQKTREEFFNLIRHQPSFF >Mature_234_residues TIASSNGSNRAQSPLIPDLAEAINTRPDRNTHNGREPELHQPSEQDMDSMMDAVRSILVGVGEDPEREGLLKTPKRVAEA MRFLTSGYNQSLEELLNGAVFDEGHNEMVLVRDINFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQV QERLTRQIAEAVQTILEPQGVAVVMEASHMCMVMRGVQKPGSWTVTSAMLGVFQEEQKTREEFFNLIRHQPSFF
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=212, Percent_Identity=57.0754716981132, Blast_Score=257, Evalue=8e-69, Organism=Homo sapiens, GI4503949, Length=212, Percent_Identity=57.0754716981132, Blast_Score=257, Evalue=8e-69, Organism=Homo sapiens, GI66932970, Length=181, Percent_Identity=50.2762430939227, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI66932972, Length=172, Percent_Identity=52.3255813953488, Blast_Score=195, Evalue=2e-50, Organism=Escherichia coli, GI1788476, Length=175, Percent_Identity=40.5714285714286, Blast_Score=121, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17560486, Length=216, Percent_Identity=58.7962962962963, Blast_Score=263, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6321706, Length=176, Percent_Identity=62.5, Blast_Score=234, Evalue=1e-62, Organism=Drosophila melanogaster, GI24656782, Length=190, Percent_Identity=60.5263157894737, Blast_Score=237, Evalue=4e-63, Organism=Drosophila melanogaster, GI24656791, Length=190, Percent_Identity=60.5263157894737, Blast_Score=237, Evalue=4e-63, Organism=Drosophila melanogaster, GI24656796, Length=190, Percent_Identity=60.5263157894737, Blast_Score=237, Evalue=6e-63,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26580; Mature: 26449
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIASSNGSNRAQSPLIPDLAEAINTRPDRNTHNGREPELHQPSEQDMDSMMDAVRSILV CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GVGEDPEREGLLKTPKRVAEAMRFLTSGYNQSLEELLNGAVFDEGHNEMVLVRDINFFSL CCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHH CEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQVQERLTRQIAEAVQTILEPQ HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVAVVMEASHMCMVMRGVQKPGSWTVTSAMLGVFQEEQKTREEFFNLIRHQPSFF CCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TIASSNGSNRAQSPLIPDLAEAINTRPDRNTHNGREPELHQPSEQDMDSMMDAVRSILV CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GVGEDPEREGLLKTPKRVAEAMRFLTSGYNQSLEELLNGAVFDEGHNEMVLVRDINFFSL CCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHH CEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQVQERLTRQIAEAVQTILEPQ HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVAVVMEASHMCMVMRGVQKPGSWTVTSAMLGVFQEEQKTREEFFNLIRHQPSFF CCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]