| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908727
Identifier: 75908727
GI number: 75908727
Start: 3107758
End: 3108030
Strand: Direct
Name: 75908727
Synonym: Ava_2513
Alternate gene names: NA
Gene position: 3107758-3108030 (Clockwise)
Preceding gene: 75908717
Following gene: 75908728
Centisome position: 48.82
GC content: 45.42
Gene sequence:
>273_bases ATGTTTACCATTGATTTAAGCATCAAGAACACTGCCTTCCCAATAACAGTGCAACGTAAGACAGCAGAGGACGCTGAGGC TGTTTATCAGCTGATTTTGGCAGCGATCCGCTCTGGTAATCCTGATATTGTGGAACTGAAGTGTGAGGGCAAGACAGAGA AAAAAATTGCTGTCCGCGCTAGTGAAATTTCTGGAGTCCAGATTACTCAGAAAGATGGTGTCACTACAAGTAGTGGTAGA GCGCCTGGATTTTTTGCCCTAGCGGGTGAGTAA
Upstream 100 bases:
>100_bases TCGCAGGAGCGCAGCACTCATGACTCAGCACTCATCATTCCCCAATCTCCAATCTCATAACGCTAAAATGAGTCCTACAG TTATATGTAATTCCTGCTAA
Downstream 100 bases:
>100_bases CCCAAGGTATCAACATGGCGGACATGGGCATTGTCGTTAAAGATTTAAATTTCAGTTGGCCGAACGGTGAGACAGCAATT CAATCTTGCTCTTTGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MFTIDLSIKNTAFPITVQRKTAEDAEAVYQLILAAIRSGNPDIVELKCEGKTEKKIAVRASEISGVQITQKDGVTTSSGR APGFFALAGE
Sequences:
>Translated_90_residues MFTIDLSIKNTAFPITVQRKTAEDAEAVYQLILAAIRSGNPDIVELKCEGKTEKKIAVRASEISGVQITQKDGVTTSSGR APGFFALAGE >Mature_90_residues MFTIDLSIKNTAFPITVQRKTAEDAEAVYQLILAAIRSGNPDIVELKCEGKTEKKIAVRASEISGVQITQKDGVTTSSGR APGFFALAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0367 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2513_ANAVT (Q3MA58)
Other databases:
- EMBL: CP000117 - RefSeq: YP_323023.1 - STRING: Q3MA58 - GeneID: 3682610 - GenomeReviews: CP000117_GR - KEGG: ava:Ava_2513 - eggNOG: NOG15377 - HOGENOM: HBG284625 - OMA: VQIYEKS - ProtClustDB: PRK13683 - BioCyc: AVAR240292:AVA_2513-MONOMER - HAMAP: MF_01360 - InterPro: IPR020885
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9614; Mature: 9614
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTIDLSIKNTAFPITVQRKTAEDAEAVYQLILAAIRSGNPDIVELKCEGKTEKKIAVRA CEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE SEISGVQITQKDGVTTSSGRAPGFFALAGE CCCCCEEEECCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MFTIDLSIKNTAFPITVQRKTAEDAEAVYQLILAAIRSGNPDIVELKCEGKTEKKIAVRA CEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE SEISGVQITQKDGVTTSSGRAPGFFALAGE CCCCCEEEECCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA