| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908555
Identifier: 75908555
GI number: 75908555
Start: 2902876
End: 2903109
Strand: Direct
Name: 75908555
Synonym: Ava_2338
Alternate gene names: NA
Gene position: 2902876-2903109 (Clockwise)
Preceding gene: 75908554
Following gene: 75908556
Centisome position: 45.6
GC content: 37.18
Gene sequence:
>234_bases ATGGATGTAGAATTACAAATCCTGGAACATTTGGCAAGAGATGCCCAGCCCACAGTTGCGCTCGTAGATGAATATTGTGC AGAGTACAAAGACCTGTTCAAAGAAGTAAGAAATTATGAATGTTTTAAATATTTACACTTAGGGATAATTTCTCCTATTA AAAGAAAATCATTACCAGAGATAGCGAAAGTAGTATCCCTTTTCTGTCACTCTCCGAGAGAGCGATCGCTATAA
Upstream 100 bases:
>100_bases TATCCATTTATTTTTAGAGTGTTTTAACCCTCTTATGTCACTTTCCGAGTAATCTAAATAAAAGGGTTAAAAGAAAAAAC TCTGGAAGGTAAGCAGGGCA
Downstream 100 bases:
>100_bases GCCTGATCAGGCAATCAATACAAGCTATCCTATTAGAAAAAAATGAGTGTTGTATTTGTTATTAGGAAAAAATCTGGCGA TTGCTTGCTACACAAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MDVELQILEHLARDAQPTVALVDEYCAEYKDLFKEVRNYECFKYLHLGIISPIKRKSLPEIAKVVSLFCHSPRERSL
Sequences:
>Translated_77_residues MDVELQILEHLARDAQPTVALVDEYCAEYKDLFKEVRNYECFKYLHLGIISPIKRKSLPEIAKVVSLFCHSPRERSL >Mature_77_residues MDVELQILEHLARDAQPTVALVDEYCAEYKDLFKEVRNYECFKYLHLGIISPIKRKSLPEIAKVVSLFCHSPRERSL
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9008; Mature: 9008
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVELQILEHLARDAQPTVALVDEYCAEYKDLFKEVRNYECFKYLHLGIISPIKRKSLPE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH IAKVVSLFCHSPRERSL HHHHHHHHHCCCCCCCC >Mature Secondary Structure MDVELQILEHLARDAQPTVALVDEYCAEYKDLFKEVRNYECFKYLHLGIISPIKRKSLPE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH IAKVVSLFCHSPRERSL HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]