| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is aroA
Identifier: 75908476
GI number: 75908476
Start: 2815323
End: 2816603
Strand: Direct
Name: aroA
Synonym: Ava_2259
Alternate gene names: 75908476
Gene position: 2815323-2816603 (Clockwise)
Preceding gene: 75908475
Following gene: 75908477
Centisome position: 44.23
GC content: 45.43
Gene sequence:
>1281_bases GTGGATACCATCGCCATCCCCGCTCTGAATCGTCCTGTGGATGCCACAGTAGAGATTCCGGGTTCCAAAAGTATCACTAA TCGGGCGTTGCTTGTTGCTGCTTTAGCACAAGGCGACTCTACTTTAGAAAATGCCTTATTTAGTGAAGATAGTGAATATT TTGCTAAATGTGTAGAGCAGTTGGGTATTCCCATCACACTCAATCCTCATCTGGCGCAAATCCAAGTTTCAGGTAAGGGA GGCGACATTCCTGCAAAACAAGCAGATTTGTTCGTGGGTTTAGCTGGTACAGCAGCAAGATTTATCACGGCATTAGTAGC ACTTGGTAATGGCGAATATCGCTTAGATGGAGTTCCCCGGATGCGAGAACGTCCAATGGGTGACTTGGTAACGGTGCTAC AAAACAGTGGCATAAAGATTAACTTTGAGGGCAACTCTGGTTTTATGCCCTACACTATTTATGGTCAGCAATTTGCAGGT GGACATTTTCGCCTCAAAGCTAACCAAACCAGTCAGCAACTCTCCGCTTTGTTGATGATTGCACCCTACGCCCAACAAGA TACAACCATTGAGGTTGAGGGTACATTGGTTTCCCAATCTTATGTAAAAATGACTTGTCGCCTGATGGCTGATTTTGGTG TAGATGTCACCCAAACCGACGACAATCAATTTCATATCAAAGCAGGTCAGCGTTACCAAGCTCGACACTATACTATAGAA CCAGATGCCTCAAATGCGTCTTATTTTTTCGCAGCCGCAGCCGTCACTGGTGGAAGAGTGCGGGTAAACCATTTAACTAA ACAATCTTGCCAAGGTGATATTTTGTGGCTGAATGTTTTAGAACAGATGGGTTGTCAGGTGCTTGAGGGTGAAGATTACA CCGAAGTGATAGGGCCAGAACAATTACAGGGTATCGACGTTGATATGAATGATATGTCGGATTTGGTGCAAACATTGGGA GCGATCGCCCCTTATGCCAACTCACCTGTTATCATCCGTAATGTAGAACATATCCGCTACAAAGAAACCGAACGTATCCG CGCCGTTGTCACCGAATTACGTCGCTTAGGCGTGAAAGTTGAAGAATTTGCCGACGGGATGAAAATTGAACCAACCCCCA TCAACCCAGCCGCCATCGAAACCTACCACGACCATAGAATGGCAATGGCTTTTGCAGTTACAGGCTTAAAGACCCCCGGT ATTGTGATTCAAGACCCAGGTTGTACAGCCAAAACATTCCCCGACTACTTTACTCGATTCTTTAAAATGATTGGGCAATA G
Upstream 100 bases:
>100_bases GGTGTATCAAAAAAACACCAAAAAATATGACTGTTCCAGCAACCTTCATCATATGGGAACATATATAAGTTGTAGCTGAC TACCCAGATAGAGGTTGAAA
Downstream 100 bases:
>100_bases TCAGTTGTCAATTGATTTAACAAAAATAGACGCATGGCAAAAAACGACAAAATTAACTTCTCAACTCCTAGCGGTTTTCC TGAATTTCTGCCTAGCGAAA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MDTIAIPALNRPVDATVEIPGSKSITNRALLVAALAQGDSTLENALFSEDSEYFAKCVEQLGIPITLNPHLAQIQVSGKG GDIPAKQADLFVGLAGTAARFITALVALGNGEYRLDGVPRMRERPMGDLVTVLQNSGIKINFEGNSGFMPYTIYGQQFAG GHFRLKANQTSQQLSALLMIAPYAQQDTTIEVEGTLVSQSYVKMTCRLMADFGVDVTQTDDNQFHIKAGQRYQARHYTIE PDASNASYFFAAAAVTGGRVRVNHLTKQSCQGDILWLNVLEQMGCQVLEGEDYTEVIGPEQLQGIDVDMNDMSDLVQTLG AIAPYANSPVIIRNVEHIRYKETERIRAVVTELRRLGVKVEEFADGMKIEPTPINPAAIETYHDHRMAMAFAVTGLKTPG IVIQDPGCTAKTFPDYFTRFFKMIGQ
Sequences:
>Translated_426_residues MDTIAIPALNRPVDATVEIPGSKSITNRALLVAALAQGDSTLENALFSEDSEYFAKCVEQLGIPITLNPHLAQIQVSGKG GDIPAKQADLFVGLAGTAARFITALVALGNGEYRLDGVPRMRERPMGDLVTVLQNSGIKINFEGNSGFMPYTIYGQQFAG GHFRLKANQTSQQLSALLMIAPYAQQDTTIEVEGTLVSQSYVKMTCRLMADFGVDVTQTDDNQFHIKAGQRYQARHYTIE PDASNASYFFAAAAVTGGRVRVNHLTKQSCQGDILWLNVLEQMGCQVLEGEDYTEVIGPEQLQGIDVDMNDMSDLVQTLG AIAPYANSPVIIRNVEHIRYKETERIRAVVTELRRLGVKVEEFADGMKIEPTPINPAAIETYHDHRMAMAFAVTGLKTPG IVIQDPGCTAKTFPDYFTRFFKMIGQ >Mature_426_residues MDTIAIPALNRPVDATVEIPGSKSITNRALLVAALAQGDSTLENALFSEDSEYFAKCVEQLGIPITLNPHLAQIQVSGKG GDIPAKQADLFVGLAGTAARFITALVALGNGEYRLDGVPRMRERPMGDLVTVLQNSGIKINFEGNSGFMPYTIYGQQFAG GHFRLKANQTSQQLSALLMIAPYAQQDTTIEVEGTLVSQSYVKMTCRLMADFGVDVTQTDDNQFHIKAGQRYQARHYTIE PDASNASYFFAAAAVTGGRVRVNHLTKQSCQGDILWLNVLEQMGCQVLEGEDYTEVIGPEQLQGIDVDMNDMSDLVQTLG AIAPYANSPVIIRNVEHIRYKETERIRAVVTELRRLGVKVEEFADGMKIEPTPINPAAIETYHDHRMAMAFAVTGLKTPG IVIQDPGCTAKTFPDYFTRFFKMIGQ
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=426, Percent_Identity=42.7230046948357, Blast_Score=318, Evalue=5e-88, Organism=Saccharomyces cerevisiae, GI6320332, Length=470, Percent_Identity=34.468085106383, Blast_Score=231, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_ANAVT (Q3MAV9)
Other databases:
- EMBL: CP000117 - RefSeq: YP_322772.1 - HSSP: P0A6D3 - STRING: Q3MAV9 - GeneID: 3679004 - GenomeReviews: CP000117_GR - KEGG: ava:Ava_2259 - NMPDR: fig|240292.3.peg.2526 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: GADIEWG - PhylomeDB: Q3MAV9 - ProtClustDB: PRK02427 - BioCyc: AVAR240292:AVA_2259-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 46691; Mature: 46691
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIAIPALNRPVDATVEIPGSKSITNRALLVAALAQGDSTLENALFSEDSEYFAKCVEQ CCCEECCCCCCCCCCEEECCCCCCCCHHHEEEEEHHCCCHHHHHHHHCCCHHHHHHHHHH LGIPITLNPHLAQIQVSGKGGDIPAKQADLFVGLAGTAARFITALVALGNGEYRLDGVPR CCCCEEECCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEECCCCC MRERPMGDLVTVLQNSGIKINFEGNSGFMPYTIYGQQFAGGHFRLKANQTSQQLSALLMI HHHCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEE APYAQQDTTIEVEGTLVSQSYVKMTCRLMADFGVDVTQTDDNQFHIKAGQRYQARHYTIE ECCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEECEEEEEC PDASNASYFFAAAAVTGGRVRVNHLTKQSCQGDILWLNVLEQMGCQVLEGEDYTEVIGPE CCCCCCCEEEEEEEECCCEEEEEEHHHHCCCCCCHHHHHHHHCCCEEECCCCCHHHCCCH QLQGIDVDMNDMSDLVQTLGAIAPYANSPVIIRNVEHIRYKETERIRAVVTELRRLGVKV HHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH EEFADGMKIEPTPINPAAIETYHDHRMAMAFAVTGLKTPGIVIQDPGCTAKTFPDYFTRF HHHHCCCEECCCCCCCHHEEEHHHHHEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHH FKMIGQ HHHHCC >Mature Secondary Structure MDTIAIPALNRPVDATVEIPGSKSITNRALLVAALAQGDSTLENALFSEDSEYFAKCVEQ CCCEECCCCCCCCCCEEECCCCCCCCHHHEEEEEHHCCCHHHHHHHHCCCHHHHHHHHHH LGIPITLNPHLAQIQVSGKGGDIPAKQADLFVGLAGTAARFITALVALGNGEYRLDGVPR CCCCEEECCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEECCCCC MRERPMGDLVTVLQNSGIKINFEGNSGFMPYTIYGQQFAGGHFRLKANQTSQQLSALLMI HHHCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEE APYAQQDTTIEVEGTLVSQSYVKMTCRLMADFGVDVTQTDDNQFHIKAGQRYQARHYTIE ECCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEECEEEEEC PDASNASYFFAAAAVTGGRVRVNHLTKQSCQGDILWLNVLEQMGCQVLEGEDYTEVIGPE CCCCCCCEEEEEEEECCCEEEEEEHHHHCCCCCCHHHHHHHHCCCEEECCCCCHHHCCCH QLQGIDVDMNDMSDLVQTLGAIAPYANSPVIIRNVEHIRYKETERIRAVVTELRRLGVKV HHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH EEFADGMKIEPTPINPAAIETYHDHRMAMAFAVTGLKTPGIVIQDPGCTAKTFPDYFTRF HHHHCCCEECCCCCCCHHEEEHHHHHEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHH FKMIGQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA