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The map label for this gene is ybjY [C]

Identifier: 75908466

GI number: 75908466

Start: 2799363

End: 2800562

Strand: Direct

Name: ybjY [C]

Synonym: Ava_2249

Alternate gene names: 75908466

Gene position: 2799363-2800562 (Clockwise)

Preceding gene: 75908458

Following gene: 75908467

Centisome position: 43.98

GC content: 45.0

Gene sequence:

>1200_bases
ATGCAAAACCTCTATCCAGACCGATTTAGGAATCTCAGTTATCCTAATAGAAAGCTCATTTTCGGTATAGTTGCCATAGC
GTTAGCAAGCGCAGCTGGTTCGCTGTATTTAGCCTCTGGCTTAGGAAATTCGGGGAAAGAAGTTACCCCATTGGTAATTG
ATCAGCGTCCTCCAATCAAGGCTATTACTGCTTTAGGGAGGATAGAACCCCAAGGTGAAGTTGTACAGGTGTCAGTTTCC
CAGACTGCTGGTAGTAACCGCATAGCAGAATTGTTGGTAAAACAAGGCGATCGCATCAACAAGGGACAAATAATTGCTAT
CCTAGATAACCGTGATACTCGACTAGCGGCTTTAAATAGAGCCAAACAACAAGTTGCAGTTGCACAATCGCAACTAGCAC
AGGTAAAAGCTGGAGCCAAACAGGGAGAAATTGCTGCTCAACAAGCCATAATTGCAGAATTAGCAGCAGAACTACGCCAA
GAAGTTGCAGCCAGAGTGGCGACGGTGAGACGCTTAGAAGCAGAAGTGAGAAATGCTCAAGTTGAATATCAGCGCTATCA
ATCGCTGCAAGCAGATGGCGCGGTTTCTGTATCTATGAGAGATAGTAAAAAACTAACTCTAGAAACCACCGAGGAAAGTT
TACGGGAAGCCTTAGCCAACCGCAGCCAAACATCAGAAACTGTGCAAGAAAGACTTAGACAAGCAAAAGCCACCTTAAAC
CGAATTGCAGAGGTGCGTCCTACAGATGTGCAAGCAGCACAAGCAGAAGTAGAAAGTGCCAAAGCCGCAGTTCAAGAAGC
CCAAGCTAATTTAGACTTGACTTATGTAAAGTCGCCTAAAGCTGGTCAAATCCTGAAAACTCATACCTTAGCTGGGGAAG
TAGTCAGTGACAAAGGTATTGTGGAAATCGGACAGACTAATCAAATGTATGTAGTTGCAGAAGTGTATGAAGTTGATATC
AACCGCGTCAAAGTTGGACAACGCGCAACTGTAACTCAACTCAACCTACCCGGAGAATTGACAGGAACCGTCGAGGATAT
TGGCTTACTAATTGCCAAAAAAGACGTACTCAACACCGATCCAGCCGCCGATATCGATGCACGAGTAGTAGAAGTCAAAA
TCCGCCTCAACCCCGAATCTAGCCAGCGAGTCACAGGTTTAACTAACTCCAAAGTCAAAGTAGCGATCGCCTTAAATTGA

Upstream 100 bases:

>100_bases
CTTAAGTGTACACTAGAACTTGTACACAACAAGTTGAATAAAACTTTGTAAATATAAAATGTTGTATACAGTAAATCTGC
CAACATCTAGGCAATGACTT

Downstream 100 bases:

>100_bases
AAACCAACAACTAACTATGAAAAGAAAAATTCCTTTAGCATGGTTGCAATTATCGCGGGAAAAGGCACGGATGTTAGTAG
CGATCGCCGGTATTGCTTTT

Product: secretion protein HlyD

Products: NA

Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; Auxiliary Transport Protein MFP Family; Transporter MFP Family; ABC-Transporter Membrane Fusion Protein; Membrane Fusion Protein Family Protein; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MQNLYPDRFRNLSYPNRKLIFGIVAIALASAAGSLYLASGLGNSGKEVTPLVIDQRPPIKAITALGRIEPQGEVVQVSVS
QTAGSNRIAELLVKQGDRINKGQIIAILDNRDTRLAALNRAKQQVAVAQSQLAQVKAGAKQGEIAAQQAIIAELAAELRQ
EVAARVATVRRLEAEVRNAQVEYQRYQSLQADGAVSVSMRDSKKLTLETTEESLREALANRSQTSETVQERLRQAKATLN
RIAEVRPTDVQAAQAEVESAKAAVQEAQANLDLTYVKSPKAGQILKTHTLAGEVVSDKGIVEIGQTNQMYVVAEVYEVDI
NRVKVGQRATVTQLNLPGELTGTVEDIGLLIAKKDVLNTDPAADIDARVVEVKIRLNPESSQRVTGLTNSKVKVAIALN

Sequences:

>Translated_399_residues
MQNLYPDRFRNLSYPNRKLIFGIVAIALASAAGSLYLASGLGNSGKEVTPLVIDQRPPIKAITALGRIEPQGEVVQVSVS
QTAGSNRIAELLVKQGDRINKGQIIAILDNRDTRLAALNRAKQQVAVAQSQLAQVKAGAKQGEIAAQQAIIAELAAELRQ
EVAARVATVRRLEAEVRNAQVEYQRYQSLQADGAVSVSMRDSKKLTLETTEESLREALANRSQTSETVQERLRQAKATLN
RIAEVRPTDVQAAQAEVESAKAAVQEAQANLDLTYVKSPKAGQILKTHTLAGEVVSDKGIVEIGQTNQMYVVAEVYEVDI
NRVKVGQRATVTQLNLPGELTGTVEDIGLLIAKKDVLNTDPAADIDARVVEVKIRLNPESSQRVTGLTNSKVKVAIALN
>Mature_399_residues
MQNLYPDRFRNLSYPNRKLIFGIVAIALASAAGSLYLASGLGNSGKEVTPLVIDQRPPIKAITALGRIEPQGEVVQVSVS
QTAGSNRIAELLVKQGDRINKGQIIAILDNRDTRLAALNRAKQQVAVAQSQLAQVKAGAKQGEIAAQQAIIAELAAELRQ
EVAARVATVRRLEAEVRNAQVEYQRYQSLQADGAVSVSMRDSKKLTLETTEESLREALANRSQTSETVQERLRQAKATLN
RIAEVRPTDVQAAQAEVESAKAAVQEAQANLDLTYVKSPKAGQILKTHTLAGEVVSDKGIVEIGQTNQMYVVAEVYEVDI
NRVKVGQRATVTQLNLPGELTGTVEDIGLLIAKKDVLNTDPAADIDARVVEVKIRLNPESSQRVTGLTNSKVKVAIALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43091; Mature: 43091

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLYPDRFRNLSYPNRKLIFGIVAIALASAAGSLYLASGLGNSGKEVTPLVIDQRPPIK
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECEEEECCCCCHH
AITALGRIEPQGEVVQVSVSQTAGSNRIAELLVKQGDRINKGQIIAILDNRDTRLAALNR
HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
AKQQVAVAQSQLAQVKAGAKQGEIAAQQAIIAELAAELRQEVAARVATVRRLEAEVRNAQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYQRYQSLQADGAVSVSMRDSKKLTLETTEESLREALANRSQTSETVQERLRQAKATLN
HHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RIAEVRPTDVQAAQAEVESAKAAVQEAQANLDLTYVKSPKAGQILKTHTLAGEVVSDKGI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHHHCHHCCCCCE
VEIGQTNQMYVVAEVYEVDINRVKVGQRATVTQLNLPGELTGTVEDIGLLIAKKDVLNTD
EEECCCCCEEEEEEEEEECCCEEECCCCCEEEEECCCCCCCCCHHHHHEEEEEHHHCCCC
PAADIDARVVEVKIRLNPESSQRVTGLTNSKVKVAIALN
CCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MQNLYPDRFRNLSYPNRKLIFGIVAIALASAAGSLYLASGLGNSGKEVTPLVIDQRPPIK
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECEEEECCCCCHH
AITALGRIEPQGEVVQVSVSQTAGSNRIAELLVKQGDRINKGQIIAILDNRDTRLAALNR
HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
AKQQVAVAQSQLAQVKAGAKQGEIAAQQAIIAELAAELRQEVAARVATVRRLEAEVRNAQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYQRYQSLQADGAVSVSMRDSKKLTLETTEESLREALANRSQTSETVQERLRQAKATLN
HHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RIAEVRPTDVQAAQAEVESAKAAVQEAQANLDLTYVKSPKAGQILKTHTLAGEVVSDKGI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHHHCHHCCCCCE
VEIGQTNQMYVVAEVYEVDINRVKVGQRATVTQLNLPGELTGTVEDIGLLIAKKDVLNTD
EEECCCCCEEEEEEEEEECCCEEECCCCCEEEEECCCCCCCCCHHHHHEEEEEHHHCCCC
PAADIDARVVEVKIRLNPESSQRVTGLTNSKVKVAIALN
CCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA