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The map label for this gene is 75908447

Identifier: 75908447

GI number: 75908447

Start: 2772484

End: 2772999

Strand: Direct

Name: 75908447

Synonym: Ava_2230

Alternate gene names: NA

Gene position: 2772484-2772999 (Clockwise)

Preceding gene: 75908444

Following gene: 75908448

Centisome position: 43.55

GC content: 41.09

Gene sequence:

>516_bases
ATGACATTCACTTCTGATTCCGCTTCAACCCGTTTTTCTCAAGCTTTCGGTATCCAAACTGGTGATGCTGTTGCTTCTAC
CATTACTGTATTTCAAGGTCTGAGTATAGATGACCAGTTGGCAGTACTATGGTACGCTTACACCGAAATGGGACGTTCTA
TTACACCAGCCGCTACAGGCGCTGCTCGTTTACAATTAGCTGAAGGTTTGTTAAATCAAATCAAGCAGATGTCTCATGCA
GAACAGTTACAAGTCATGCGTGACTTAGCTGCAAAAAATAATACTCAATTTTCTCGCTCTTACGGTATCCTCAGCAATAA
TACCAAGTTGGCTTTCTGGTATGAATTATCAGAATTAATGGTTAAAGGCTTCGTCGTACCCGTACCAACAGACTATAAAA
TTTCTCGTGATGGCTCTCAAGTATTAGAAGCACTGAAAGGATTAGACTTTGGTCAACAAATCACCGTTCTCCGCAAAGTA
GTTGCTGATATGGGTGTTGACCCTTTAGCTGATTAA

Upstream 100 bases:

>100_bases
GAAATAATGCAACATAGATGCAAGAGGACAAGCAACCCAGAGTGATGCAACCCTCCCACTGATTCGCAAAGTATATAAAC
CCATCGACTGTGGTGCAATC

Downstream 100 bases:

>100_bases
CTATCTAACAATATCTTTCCAACCTCAATGTCATACTAGTTTTAGTTCCTAGATATTTATTTAGGAACTAAATCTTACTT
AAGTAAGAGTGTCTGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: OCP; RCP [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTFTSDSASTRFSQAFGIQTGDAVASTITVFQGLSIDDQLAVLWYAYTEMGRSITPAATGAARLQLAEGLLNQIKQMSHA
EQLQVMRDLAAKNNTQFSRSYGILSNNTKLAFWYELSELMVKGFVVPVPTDYKISRDGSQVLEALKGLDFGQQITVLRKV
VADMGVDPLAD

Sequences:

>Translated_171_residues
MTFTSDSASTRFSQAFGIQTGDAVASTITVFQGLSIDDQLAVLWYAYTEMGRSITPAATGAARLQLAEGLLNQIKQMSHA
EQLQVMRDLAAKNNTQFSRSYGILSNNTKLAFWYELSELMVKGFVVPVPTDYKISRDGSQVLEALKGLDFGQQITVLRKV
VADMGVDPLAD
>Mature_170_residues
TFTSDSASTRFSQAFGIQTGDAVASTITVFQGLSIDDQLAVLWYAYTEMGRSITPAATGAARLQLAEGLLNQIKQMSHAE
QLQVMRDLAAKNNTQFSRSYGILSNNTKLAFWYELSELMVKGFVVPVPTDYKISRDGSQVLEALKGLDFGQQITVLRKVV
ADMGVDPLAD

Specific function: Acts as a photo-protectant. Essential for inhibiting white and blue-green light non-photochemical quenching (NPQ). Binding carotenoids improves OCP's intrinsic photoprotectant activity by broadening its absorption spectrum and facilitating the dissipation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane. Note=Associated with the phycobilisome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002075
- InterPro:   IPR015233 [H]

Pfam domain/function: PF09150 Carot_N; PF02136 NTF2 [H]

EC number: NA

Molecular weight: Translated: 18692; Mature: 18561

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTSDSASTRFSQAFGIQTGDAVASTITVFQGLSIDDQLAVLWYAYTEMGRSITPAATG
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH
AARLQLAEGLLNQIKQMSHAEQLQVMRDLAAKNNTQFSRSYGILSNNTKLAFWYELSELM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEECCCEEEEHHHHHHHH
VKGFVVPVPTDYKISRDGSQVLEALKGLDFGQQITVLRKVVADMGVDPLAD
HHCEEEECCCCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TFTSDSASTRFSQAFGIQTGDAVASTITVFQGLSIDDQLAVLWYAYTEMGRSITPAATG
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH
AARLQLAEGLLNQIKQMSHAEQLQVMRDLAAKNNTQFSRSYGILSNNTKLAFWYELSELM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEECCCEEEEHHHHHHHH
VKGFVVPVPTDYKISRDGSQVLEALKGLDFGQQITVLRKVVADMGVDPLAD
HHCEEEECCCCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA