Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908420

Identifier: 75908420

GI number: 75908420

Start: 2732243

End: 2734315

Strand: Direct

Name: 75908420

Synonym: Ava_2201

Alternate gene names: NA

Gene position: 2732243-2734315 (Clockwise)

Preceding gene: 75908419

Following gene: 75908421

Centisome position: 42.92

GC content: 38.45

Gene sequence:

>2073_bases
ATGAAGCTGACTTCAATTAAACTATGCAATTTTCGCTCCTTTTATGGCAGAACACCAGAGATAGTTATTGCTGGAGGAGA
TGTTCTTAACACTACGATTATTCATGGGAATAATGGCTCAGGTAAAACTAGTTTACTGAATGCCTTTACGTGGGTATTAT
ATGAGAAGTTTAGTGCAGCGTTTGCCTCGATAGAACAACTGGTGAATAAAAGAGCGATCGCTGAAGCTAAACTCGGACAA
GCTGTAGAATGTTGGGTAGAGATTAACTGGGAACACGAAGGTAAACGCTACAACGTCAAACGCCAATGTAAAGGCTATAA
AAATAAAACCGACTTTGCTGTGGGTAAAACAGAATTACTCATGCAGGTAGCTGGGGATGATGGCAGATGGTATTACCCCA
GCCAACAACCAGAAGAAATCATTGGACAGATTTTACCAGTTAGCTTACATCAATATTTTTTCTTTGACGGCGAACGCATA
GAAGAAATCGTGCGTTCTGATAAAAAAGCGGAAATTGCCGAAGCGACTAAAATCTTCTTGGGTGTGGAAGTAATTAACCG
TTCTATCAGACATTTAGGTGAAGCTAAAAAAAGTTTAGAAAATGAGTTAAAAGCAATTGGTGACTCCGAGATTAAACAGC
TGTTGCGTGAACAAGAGAAACTAGAACAGGAAATTGAACGCATTCACACCAGACAAACAGAAATTAAGCAAGAGTTAGAA
TATCAACAGACCTTTAAGAAAGAAACGGGTAATCGTTTACAAGAATTAAGTGCAGCCAAGGAACTGCAACAAAGACGACA
AGAACTAGAAAATCAAAAAAACTCCAATCAAGAAAGCCTCAGACAAACTAGAGAATCACTAAAGAAAATTATTTCTGCAC
GGGGTTACACAGTATTATTATCAGATACTACAGCCCAGTTTCGGACGATTATAAATCAACTTAAGCAACAAGGTGACTTA
ACCTCTGGCATTTCACGAGAATTTATTCATGAATTATTAAAGTCCCAACGCTGTATTTGTGGTGCAGAATTACATGAAGG
TAATCATGCTCACACAAATGTGAGTCTCTGGTTAAATCAAGCAGGTTCCTCGGCGGTGGAAGAAACAGCAATTCGCATGA
GCGCTCAAGTAGACGAAATTGATAAACAAGCGATCGTATTTTGGGAAGAAGTTGATAAGGAACAAGCGAGAATCAATCAG
TTACGGCAAAATATATCTCAAGTTGAAAACGAATTAGAAACTATTCAAGAACGCTTACGCAAAGACGCTAACGAAGAAAT
TAGCAGTTTACAAAAGCGGTTAGATGAGATTGAAAGTAAAATTGATGAATTAAATAGAGAACAAGGTGCAAATCAGCAAG
AAATTTCTCATGTACAGGCTGATATTGATGCTTTAGTTAAACAAATTGCTAAACAAAAGCTCAATGAAGAAAAGCAGTTA
TTGGCACAAAGGCGGATTAACGCTACACAAGACGCAATTGAACGCTTAACAGAAGTCAGAAATCGCCAAGAAAATCAGTT
TCGACTGCAATTAGAAAAGCGCTTGCAAGAGATATTTAACTCCGTATCTTTTACGCCTTATGTACCTAAAATCAGTGATA
AATATGAATTGACTCTTGTAGAAAGTACATCAGGAATGGAAGCATCAGTTGCAGCCTCTACTGGTGAAAACCAAATCCTG
AGCTTGTCTTTTATTGCCAGTATTATTGATAAAGTTAGAGATTGGAGCGAAAAACGCAAAATCTTAACAGTACCCGATAG
CAGTACTTTTCCCATCGTCATGGATTCCCCATTTGGAAGTTTAGATGAAACCTATCGCCGACGCATTGCTCAAACATTAC
CGGAGTTAGCTAATCAGTTAATAGTGTTAGTCACAAAAACTCAATGGCGGGGAGAAGTGGAAACAGAGATGACAGATAGA
ATTGGTAGGGAATATGTGCTGACTTACTACTCTTCTAAGCCAGATTGTGAACAAGATTATATTGAATTGGGTGGGGGAAG
ATATCCTTTGGTGAAACAAAGCCCGAATGAATTTGAATATACCGAGGTGATAGTGGTAGAGAGGGAGTGGTGA

Upstream 100 bases:

>100_bases
TTATTGAGCGGGTATGGCATCTGGAAAAAAACAGACTAGATAAAAAAAGCAATAGCCCCATCAATGATGATATTTTGACA
ATTGTGAAGGAAGCGGTGCA

Downstream 100 bases:

>100_bases
TATTCGCAGATAAAACATACATAAATTTGAGAGGTTATTTATAGCGATTCCTCGTGAAGTTGGGTGCAGAATTAATGTTT
TTAAACGCAGAGGGGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYEKFSAAFASIEQLVNKRAIAEAKLGQ
AVECWVEINWEHEGKRYNVKRQCKGYKNKTDFAVGKTELLMQVAGDDGRWYYPSQQPEEIIGQILPVSLHQYFFFDGERI
EEIVRSDKKAEIAEATKIFLGVEVINRSIRHLGEAKKSLENELKAIGDSEIKQLLREQEKLEQEIERIHTRQTEIKQELE
YQQTFKKETGNRLQELSAAKELQQRRQELENQKNSNQESLRQTRESLKKIISARGYTVLLSDTTAQFRTIINQLKQQGDL
TSGISREFIHELLKSQRCICGAELHEGNHAHTNVSLWLNQAGSSAVEETAIRMSAQVDEIDKQAIVFWEEVDKEQARINQ
LRQNISQVENELETIQERLRKDANEEISSLQKRLDEIESKIDELNREQGANQQEISHVQADIDALVKQIAKQKLNEEKQL
LAQRRINATQDAIERLTEVRNRQENQFRLQLEKRLQEIFNSVSFTPYVPKISDKYELTLVESTSGMEASVAASTGENQIL
SLSFIASIIDKVRDWSEKRKILTVPDSSTFPIVMDSPFGSLDETYRRRIAQTLPELANQLIVLVTKTQWRGEVETEMTDR
IGREYVLTYYSSKPDCEQDYIELGGGRYPLVKQSPNEFEYTEVIVVEREW

Sequences:

>Translated_690_residues
MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYEKFSAAFASIEQLVNKRAIAEAKLGQ
AVECWVEINWEHEGKRYNVKRQCKGYKNKTDFAVGKTELLMQVAGDDGRWYYPSQQPEEIIGQILPVSLHQYFFFDGERI
EEIVRSDKKAEIAEATKIFLGVEVINRSIRHLGEAKKSLENELKAIGDSEIKQLLREQEKLEQEIERIHTRQTEIKQELE
YQQTFKKETGNRLQELSAAKELQQRRQELENQKNSNQESLRQTRESLKKIISARGYTVLLSDTTAQFRTIINQLKQQGDL
TSGISREFIHELLKSQRCICGAELHEGNHAHTNVSLWLNQAGSSAVEETAIRMSAQVDEIDKQAIVFWEEVDKEQARINQ
LRQNISQVENELETIQERLRKDANEEISSLQKRLDEIESKIDELNREQGANQQEISHVQADIDALVKQIAKQKLNEEKQL
LAQRRINATQDAIERLTEVRNRQENQFRLQLEKRLQEIFNSVSFTPYVPKISDKYELTLVESTSGMEASVAASTGENQIL
SLSFIASIIDKVRDWSEKRKILTVPDSSTFPIVMDSPFGSLDETYRRRIAQTLPELANQLIVLVTKTQWRGEVETEMTDR
IGREYVLTYYSSKPDCEQDYIELGGGRYPLVKQSPNEFEYTEVIVVEREW
>Mature_690_residues
MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYEKFSAAFASIEQLVNKRAIAEAKLGQ
AVECWVEINWEHEGKRYNVKRQCKGYKNKTDFAVGKTELLMQVAGDDGRWYYPSQQPEEIIGQILPVSLHQYFFFDGERI
EEIVRSDKKAEIAEATKIFLGVEVINRSIRHLGEAKKSLENELKAIGDSEIKQLLREQEKLEQEIERIHTRQTEIKQELE
YQQTFKKETGNRLQELSAAKELQQRRQELENQKNSNQESLRQTRESLKKIISARGYTVLLSDTTAQFRTIINQLKQQGDL
TSGISREFIHELLKSQRCICGAELHEGNHAHTNVSLWLNQAGSSAVEETAIRMSAQVDEIDKQAIVFWEEVDKEQARINQ
LRQNISQVENELETIQERLRKDANEEISSLQKRLDEIESKIDELNREQGANQQEISHVQADIDALVKQIAKQKLNEEKQL
LAQRRINATQDAIERLTEVRNRQENQFRLQLEKRLQEIFNSVSFTPYVPKISDKYELTLVESTSGMEASVAASTGENQIL
SLSFIASIIDKVRDWSEKRKILTVPDSSTFPIVMDSPFGSLDETYRRRIAQTLPELANQLIVLVTKTQWRGEVETEMTDR
IGREYVLTYYSSKPDCEQDYIELGGGRYPLVKQSPNEFEYTEVIVVEREW

Specific function: Unknown

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79489; Mature: 79489

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYEKFSAA
CCCCEEEEECCHHHHCCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FASIEQLVNKRAIAEAKLGQAVECWVEINWEHEGKRYNVKRQCKGYKNKTDFAVGKTELL
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHH
MQVAGDDGRWYYPSQQPEEIIGQILPVSLHQYFFFDGERIEEIVRSDKKAEIAEATKIFL
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHH
GVEVINRSIRHLGEAKKSLENELKAIGDSEIKQLLREQEKLEQEIERIHTRQTEIKQELE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQTFKKETGNRLQELSAAKELQQRRQELENQKNSNQESLRQTRESLKKIISARGYTVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE
SDTTAQFRTIINQLKQQGDLTSGISREFIHELLKSQRCICGAELHEGNHAHTNVSLWLNQ
ECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCCCCEEEEEC
AGSSAVEETAIRMSAQVDEIDKQAIVFWEEVDKEQARINQLRQNISQVENELETIQERLR
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDANEEISSLQKRLDEIESKIDELNREQGANQQEISHVQADIDALVKQIAKQKLNEEKQL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LAQRRINATQDAIERLTEVRNRQENQFRLQLEKRLQEIFNSVSFTPYVPKISDKYELTLV
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ESTSGMEASVAASTGENQILSLSFIASIIDKVRDWSEKRKILTVPDSSTFPIVMDSPFGS
ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCCCC
LDETYRRRIAQTLPELANQLIVLVTKTQWRGEVETEMTDRIGREYVLTYYSSKPDCEQDY
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHEEEEEECCCCCCHHHH
IELGGGRYPLVKQSPNEFEYTEVIVVEREW
HHHCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKLTSIKLCNFRSFYGRTPEIVIAGGDVLNTTIIHGNNGSGKTSLLNAFTWVLYEKFSAA
CCCCEEEEECCHHHHCCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FASIEQLVNKRAIAEAKLGQAVECWVEINWEHEGKRYNVKRQCKGYKNKTDFAVGKTELL
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHH
MQVAGDDGRWYYPSQQPEEIIGQILPVSLHQYFFFDGERIEEIVRSDKKAEIAEATKIFL
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHHHHHHHHHHHH
GVEVINRSIRHLGEAKKSLENELKAIGDSEIKQLLREQEKLEQEIERIHTRQTEIKQELE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQTFKKETGNRLQELSAAKELQQRRQELENQKNSNQESLRQTRESLKKIISARGYTVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE
SDTTAQFRTIINQLKQQGDLTSGISREFIHELLKSQRCICGAELHEGNHAHTNVSLWLNQ
ECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCCCCEEEEEC
AGSSAVEETAIRMSAQVDEIDKQAIVFWEEVDKEQARINQLRQNISQVENELETIQERLR
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDANEEISSLQKRLDEIESKIDELNREQGANQQEISHVQADIDALVKQIAKQKLNEEKQL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LAQRRINATQDAIERLTEVRNRQENQFRLQLEKRLQEIFNSVSFTPYVPKISDKYELTLV
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ESTSGMEASVAASTGENQILSLSFIASIIDKVRDWSEKRKILTVPDSSTFPIVMDSPFGS
ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCCCC
LDETYRRRIAQTLPELANQLIVLVTKTQWRGEVETEMTDRIGREYVLTYYSSKPDCEQDY
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCHHEEEEEECCCCCCHHHH
IELGGGRYPLVKQSPNEFEYTEVIVVEREW
HHHCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA