| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908415
Identifier: 75908415
GI number: 75908415
Start: 2724972
End: 2726903
Strand: Direct
Name: 75908415
Synonym: Ava_2196
Alternate gene names: NA
Gene position: 2724972-2726903 (Clockwise)
Preceding gene: 75908413
Following gene: 75908416
Centisome position: 42.81
GC content: 37.73
Gene sequence:
>1932_bases ATGAGTGTTATTACTATCCAATGTCGATTAATAGCCAGCGAAGCTACCCGCAGCTATCTGTGGCAATTGATGGCACAGAA AAATACACCTTTGATTAACGAACTAATTGAACAGCTAGGAATACATCCTGAGATAGAGCAGTGGTTGAAAAAGGGCAAGC TACCAGATGGAGTAGTCAAACCACTGTGCGACTCACTCATTACGCAAGAATCTTTTGCTAATCAACCCAAACGTTTTAAT AAATCTGCTATTGAGGTAGTTGAGTATATTTACAAGTCATGGCTAGCTTTACAGAAAGAGCGACAACAAACAATAGATAG AAAAGAACATTGGCTCAAGATGCTCAAAAGCGATGTGGAATTGGAGCAAGAGAGTAAATGTACTTTAGATGCTATTCGCT CTCAAGCTACTAAAATTCTGCCGAAATATCTTGCTCAATCCGAACAAAATAATAATCAGACTCAGAGTCAAAACAAGAAA AAGAGTAAAAAAAGTAAAACTAAAAACGAGAACTCTACATTATTTGATATTTTATTCAAAGCTTATGACAAAGCGAAAAA TCCCCTTAATCGATGCACTCTTGCGTATTTGCTCAAAAATAACTGTCAGGTTAGCCAAAAAGACGAAGACCCAAATCAGT ATGCTCTACGCCGCAGTAAGAAAGAGAAAGAAATTGAACGTCTCAAAAAACAACTACAATCTAGGAAACCCAATGGTCGT GATTTGACAGGAAGAGAGTGGCAACAAACTCTCATAATGGCAACTTCATCTGTTCCTGAAAGTAACGATGAAGCTAATAT TTGGCAGAAACGTCTTTTAAAAAAAGATATTTCACTCCCATTCCCAATTCGATTCAGAACTAACGAAGACCTAATTTGGT CAAAAAATGAAGAAGGACGTATTTGTGTTAGCTTCTCAGGTGAAGGATTGAATGATCACATCTTTGAAATATACTGCGGC AATAGACAAATTCACTGGTTTCAAAGATTTTTAGAAGATCAGAACATCAAAAACGATAATAATGACCAGCATTCATCTGC TCTGTTCACTTTACGTTCGGCAATTTTAGCGTGGCAAGAAAATAAACAACATAAAGAAAATAGCCTCCCTTGGAATACTC GTCGTTTAACTCTTTATTGCACCCTTGATACACGCTTGTGGACAACTGACGGTACTGAGAAGGTAAAGCAAGAGAAAGTA GACGAATTTACTCAACAATTGGCCAACATGGAACAGAAAGAAAACCTCAATCAGAATCAGCAAAATTATGTCAAACGCCT GCAATCAACATTAAATAAACTCAACAATGCTTACCCACGTCATAATCATGATTTGTATCAGGGTAAACCATCAATTCTAG TTGGTGTGAGTTTAGGTTTAGAAAAGCCTGCAACATTAGCTATTGTGGACAGTTCCACAAATATAGTTCTTGCATATCGT AGTATCAAACAGCTACTTGGCGATAATTACAAGTTGCTGAACCGCCAGCGACAGCAGCAGCAACGTAACTCTCATGAACG CCACAAAGCTCAAAAAAGCAATATGCCAAATAAGTTATCAGAATCTGATTTAGGAAAGTACATTGATAACTTACTAGCAC AAGCAATTATCGCATTAGCTAAAAATTACCAAGCTGGCAGTATTGTTCTACCGACAATGAAAAATGTACGGGAGAGCATT CAAAGTGAAATAGAAGCTAGGGCAGTTAAAAGATGTCCTAATTACAAGGAAGGTCAGCAACAGTATGCTAAACAGTACCG CCAGAGCATTCATCGTTGGAGTTACAACAGATTGATGCAGTTTATTCAGAGTCAAGCAGTTAAGGCAAACATTTCTATAG AGCAAGGGCCACAACCGATTCGAGGTAGTTCTCAAGAAAAAGCGCGAGATTTAGCGATCGCAGCTTACTATTTACGCCAA AATAAATCTTAA
Upstream 100 bases:
>100_bases CGATAATAAATCTACACATAATAAATGTGATTTTGCACACTATAAGTGTTAATTTAAGAATACTGGTGTATTTAGTACAG TTCAGGGAGCAGAAAACGCT
Downstream 100 bases:
>100_bases TTTTTGATTAAGCAAATATACTGAACCTTGACAATAAAATAAGTAATAGCGCCGCAGTTCATGTTAAACCTCTGAACTGT GAAAAATCTGGGTTAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MSVITIQCRLIASEATRSYLWQLMAQKNTPLINELIEQLGIHPEIEQWLKKGKLPDGVVKPLCDSLITQESFANQPKRFN KSAIEVVEYIYKSWLALQKERQQTIDRKEHWLKMLKSDVELEQESKCTLDAIRSQATKILPKYLAQSEQNNNQTQSQNKK KSKKSKTKNENSTLFDILFKAYDKAKNPLNRCTLAYLLKNNCQVSQKDEDPNQYALRRSKKEKEIERLKKQLQSRKPNGR DLTGREWQQTLIMATSSVPESNDEANIWQKRLLKKDISLPFPIRFRTNEDLIWSKNEEGRICVSFSGEGLNDHIFEIYCG NRQIHWFQRFLEDQNIKNDNNDQHSSALFTLRSAILAWQENKQHKENSLPWNTRRLTLYCTLDTRLWTTDGTEKVKQEKV DEFTQQLANMEQKENLNQNQQNYVKRLQSTLNKLNNAYPRHNHDLYQGKPSILVGVSLGLEKPATLAIVDSSTNIVLAYR SIKQLLGDNYKLLNRQRQQQQRNSHERHKAQKSNMPNKLSESDLGKYIDNLLAQAIIALAKNYQAGSIVLPTMKNVRESI QSEIEARAVKRCPNYKEGQQQYAKQYRQSIHRWSYNRLMQFIQSQAVKANISIEQGPQPIRGSSQEKARDLAIAAYYLRQ NKS
Sequences:
>Translated_643_residues MSVITIQCRLIASEATRSYLWQLMAQKNTPLINELIEQLGIHPEIEQWLKKGKLPDGVVKPLCDSLITQESFANQPKRFN KSAIEVVEYIYKSWLALQKERQQTIDRKEHWLKMLKSDVELEQESKCTLDAIRSQATKILPKYLAQSEQNNNQTQSQNKK KSKKSKTKNENSTLFDILFKAYDKAKNPLNRCTLAYLLKNNCQVSQKDEDPNQYALRRSKKEKEIERLKKQLQSRKPNGR DLTGREWQQTLIMATSSVPESNDEANIWQKRLLKKDISLPFPIRFRTNEDLIWSKNEEGRICVSFSGEGLNDHIFEIYCG NRQIHWFQRFLEDQNIKNDNNDQHSSALFTLRSAILAWQENKQHKENSLPWNTRRLTLYCTLDTRLWTTDGTEKVKQEKV DEFTQQLANMEQKENLNQNQQNYVKRLQSTLNKLNNAYPRHNHDLYQGKPSILVGVSLGLEKPATLAIVDSSTNIVLAYR SIKQLLGDNYKLLNRQRQQQQRNSHERHKAQKSNMPNKLSESDLGKYIDNLLAQAIIALAKNYQAGSIVLPTMKNVRESI QSEIEARAVKRCPNYKEGQQQYAKQYRQSIHRWSYNRLMQFIQSQAVKANISIEQGPQPIRGSSQEKARDLAIAAYYLRQ NKS >Mature_642_residues SVITIQCRLIASEATRSYLWQLMAQKNTPLINELIEQLGIHPEIEQWLKKGKLPDGVVKPLCDSLITQESFANQPKRFNK SAIEVVEYIYKSWLALQKERQQTIDRKEHWLKMLKSDVELEQESKCTLDAIRSQATKILPKYLAQSEQNNNQTQSQNKKK SKKSKTKNENSTLFDILFKAYDKAKNPLNRCTLAYLLKNNCQVSQKDEDPNQYALRRSKKEKEIERLKKQLQSRKPNGRD LTGREWQQTLIMATSSVPESNDEANIWQKRLLKKDISLPFPIRFRTNEDLIWSKNEEGRICVSFSGEGLNDHIFEIYCGN RQIHWFQRFLEDQNIKNDNNDQHSSALFTLRSAILAWQENKQHKENSLPWNTRRLTLYCTLDTRLWTTDGTEKVKQEKVD EFTQQLANMEQKENLNQNQQNYVKRLQSTLNKLNNAYPRHNHDLYQGKPSILVGVSLGLEKPATLAIVDSSTNIVLAYRS IKQLLGDNYKLLNRQRQQQQRNSHERHKAQKSNMPNKLSESDLGKYIDNLLAQAIIALAKNYQAGSIVLPTMKNVRESIQ SEIEARAVKRCPNYKEGQQQYAKQYRQSIHRWSYNRLMQFIQSQAVKANISIEQGPQPIRGSSQEKARDLAIAAYYLRQN KS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74957; Mature: 74826
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVITIQCRLIASEATRSYLWQLMAQKNTPLINELIEQLGIHPEIEQWLKKGKLPDGVVK CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHH PLCDSLITQESFANQPKRFNKSAIEVVEYIYKSWLALQKERQQTIDRKEHWLKMLKSDVE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEQESKCTLDAIRSQATKILPKYLAQSEQNNNQTQSQNKKKSKKSKTKNENSTLFDILFK CCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH AYDKAKNPLNRCTLAYLLKNNCQVSQKDEDPNQYALRRSKKEKEIERLKKQLQSRKPNGR HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DLTGREWQQTLIMATSSVPESNDEANIWQKRLLKKDISLPFPIRFRTNEDLIWSKNEEGR CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCCCC ICVSFSGEGLNDHIFEIYCGNRQIHWFQRFLEDQNIKNDNNDQHSSALFTLRSAILAWQE EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH NKQHKENSLPWNTRRLTLYCTLDTRLWTTDGTEKVKQEKVDEFTQQLANMEQKENLNQNQ HHHHHHCCCCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHH QNYVKRLQSTLNKLNNAYPRHNHDLYQGKPSILVGVSLGLEKPATLAIVDSSTNIVLAYR HHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEHH SIKQLLGDNYKLLNRQRQQQQRNSHERHKAQKSNMPNKLSESDLGKYIDNLLAQAIIALA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KNYQAGSIVLPTMKNVRESIQSEIEARAVKRCPNYKEGQQQYAKQYRQSIHRWSYNRLMQ HCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH FIQSQAVKANISIEQGPQPIRGSSQEKARDLAIAAYYLRQNKS HHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVITIQCRLIASEATRSYLWQLMAQKNTPLINELIEQLGIHPEIEQWLKKGKLPDGVVK CEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHH PLCDSLITQESFANQPKRFNKSAIEVVEYIYKSWLALQKERQQTIDRKEHWLKMLKSDVE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEQESKCTLDAIRSQATKILPKYLAQSEQNNNQTQSQNKKKSKKSKTKNENSTLFDILFK CCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH AYDKAKNPLNRCTLAYLLKNNCQVSQKDEDPNQYALRRSKKEKEIERLKKQLQSRKPNGR HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DLTGREWQQTLIMATSSVPESNDEANIWQKRLLKKDISLPFPIRFRTNEDLIWSKNEEGR CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCCCC ICVSFSGEGLNDHIFEIYCGNRQIHWFQRFLEDQNIKNDNNDQHSSALFTLRSAILAWQE EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH NKQHKENSLPWNTRRLTLYCTLDTRLWTTDGTEKVKQEKVDEFTQQLANMEQKENLNQNQ HHHHHHCCCCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHH QNYVKRLQSTLNKLNNAYPRHNHDLYQGKPSILVGVSLGLEKPATLAIVDSSTNIVLAYR HHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEHH SIKQLLGDNYKLLNRQRQQQQRNSHERHKAQKSNMPNKLSESDLGKYIDNLLAQAIIALA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KNYQAGSIVLPTMKNVRESIQSEIEARAVKRCPNYKEGQQQYAKQYRQSIHRWSYNRLMQ HCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH FIQSQAVKANISIEQGPQPIRGSSQEKARDLAIAAYYLRQNKS HHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA