Click here to switch to the map view.

The map label for this gene is atoS [H]

Identifier: 75908395

GI number: 75908395

Start: 2693647

End: 2695302

Strand: Direct

Name: atoS [H]

Synonym: Ava_2176

Alternate gene names: 75908395

Gene position: 2693647-2695302 (Clockwise)

Preceding gene: 75908393

Following gene: 75908398

Centisome position: 42.31

GC content: 33.27

Gene sequence:

>1656_bases
ATGTTTCAGAAGCTAGATATTAAATCAATTTTTTTTAAATTGCTTCGTCTCCCGTTCAAACTGCTACCATCTCAGTTAAT
TACTCTCACGGTTGTACTAACTCTCCTATTATTTTTGCCACAAACATGGGTCACTTGGCAAGCTTACAATGATTTCAATA
GTATTATCAAAAATGAATTAAGACTACAGAGTCTTAGTGAAAAAATTACTTATTATGATGAAGTTCTGACAATGTCAGCA
CGCATGAATGCTGTAACAGCTAATTCTGTGTGGGAAAGAAGGTATCGTCAATTTGAACCTTTATTAGATGCAGTAATTAA
AGAATCTATTCAACTTGCGCCCGAAGTTTATAATAATCAAGATGCTAAGGAAACTGATTTAGCAAATAAACGTTTAGTGG
AGATGGAATATAAATCTTTTGATTTAGTAAGAAAAGGCCAAGCACTAGCTGCGAGATCACTTTTACTAAGTTCACAATAT
GAATCGGAGAAACGAAAGTACGCATCCGGTGTTAATAAAATCAATCAGGCGATCGCTATACTGATAGATGAAAGAGTCTT
AAAATATAAAATATATCTATTGTGGTCAATTGGTGGCTCAGTTACTAGCTTGGCTTTTCTTATCCCTTCATGGTTATTGG
TATTACGTTTATTAAAGAATTATTTAACAACCAGTAAAATGGCTCAAATAACACTCAGGGATCTCAATTATGAATTAGAG
ATGCGCGTAGAAAAAAGAGCAAAAGAATTGCGATATAAAAATGATCAACTAACCCAAACATTACAAAAATTACAACAAAC
TCAGCTTCAATTAATTCAAACTGAAAAAATGTCATCTCTGGGTGAGATGGTGGCTGGTATTGCCCATGAAATAAATAATC
CGATTACTTTTGTTAAAAACAACGTTAGTTATGTCAAGGAATACTCCCAGGATTTATTAAACCTAATACGGAGTTATCAA
GATTACTATACCCAACCCCCCGATATTATCCAAGTACAAATTAACGAGATAGATTTAGAATTTATCCAGGGAGATTTTAT
CAAAATCCTCAACTCTATAGAATACGGCACTGATAGAGTTGAGAAAATTGTTAAATCCCTACGTAATTTTTCTCGCCTTG
ATGAAGCCGAAATTAAATCAGTCGATATTCATGAAGGAATTGATAGCACTTTGATGATTCTATCTCACCGATTGACAGCT
ATAGACAAACATCCAGAAATTTTGCTCATCAAAGAATATGCTTCATTACCATTGGTAGAATGTTATCCTGGTTTACTCAA
TCAGGTTTTTATGAATATTCTTGTTAATGCCATAGATGCTTTACATGAATATAATTGGCAACGCACAGATGATGAAATTA
AGAATAGCCCTTCTAGGATTCAGATTTGCACTCATCAAATGAATGAATCTTGGATACAAATTCGGATTATCGATAATGGT
ATAGGTATTCCAGAAAATATTCGTGACAAATTGTTTAATCCATTTTTTACAACTAAGCCACTAGGTAAAGGTACGGGTAT
AGGATTATCAATTAGTTACCAAATTATTGTGGAGAAGCATACTGGAAAGCTGTACTGTAATTCTACAGAAGAACAAGGTA
CAGAATTTGTGATTGAAATTCCAATTACTCAAAATTCGTCTACATTCACGAATTAG

Upstream 100 bases:

>100_bases
TTAGCCTTGTCTTTTTAGCAATCAAATCAGATTCAGATATTTACTAATTATTTATTAATCTAGATTAAGTATCTTACGAA
AATTAATATATAGTCTCACT

Downstream 100 bases:

>100_bases
ATAACGCTATTTAACAATTGTCGAAGTAAAAATAGGTGTCCCTGGGCTTTGGGGTTTTTGGACAAGTCTAATAGTTTCTT
GACAAACTACTAGTAGAGAC

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MFQKLDIKSIFFKLLRLPFKLLPSQLITLTVVLTLLLFLPQTWVTWQAYNDFNSIIKNELRLQSLSEKITYYDEVLTMSA
RMNAVTANSVWERRYRQFEPLLDAVIKESIQLAPEVYNNQDAKETDLANKRLVEMEYKSFDLVRKGQALAARSLLLSSQY
ESEKRKYASGVNKINQAIAILIDERVLKYKIYLLWSIGGSVTSLAFLIPSWLLVLRLLKNYLTTSKMAQITLRDLNYELE
MRVEKRAKELRYKNDQLTQTLQKLQQTQLQLIQTEKMSSLGEMVAGIAHEINNPITFVKNNVSYVKEYSQDLLNLIRSYQ
DYYTQPPDIIQVQINEIDLEFIQGDFIKILNSIEYGTDRVEKIVKSLRNFSRLDEAEIKSVDIHEGIDSTLMILSHRLTA
IDKHPEILLIKEYASLPLVECYPGLLNQVFMNILVNAIDALHEYNWQRTDDEIKNSPSRIQICTHQMNESWIQIRIIDNG
IGIPENIRDKLFNPFFTTKPLGKGTGIGLSISYQIIVEKHTGKLYCNSTEEQGTEFVIEIPITQNSSTFTN

Sequences:

>Translated_551_residues
MFQKLDIKSIFFKLLRLPFKLLPSQLITLTVVLTLLLFLPQTWVTWQAYNDFNSIIKNELRLQSLSEKITYYDEVLTMSA
RMNAVTANSVWERRYRQFEPLLDAVIKESIQLAPEVYNNQDAKETDLANKRLVEMEYKSFDLVRKGQALAARSLLLSSQY
ESEKRKYASGVNKINQAIAILIDERVLKYKIYLLWSIGGSVTSLAFLIPSWLLVLRLLKNYLTTSKMAQITLRDLNYELE
MRVEKRAKELRYKNDQLTQTLQKLQQTQLQLIQTEKMSSLGEMVAGIAHEINNPITFVKNNVSYVKEYSQDLLNLIRSYQ
DYYTQPPDIIQVQINEIDLEFIQGDFIKILNSIEYGTDRVEKIVKSLRNFSRLDEAEIKSVDIHEGIDSTLMILSHRLTA
IDKHPEILLIKEYASLPLVECYPGLLNQVFMNILVNAIDALHEYNWQRTDDEIKNSPSRIQICTHQMNESWIQIRIIDNG
IGIPENIRDKLFNPFFTTKPLGKGTGIGLSISYQIIVEKHTGKLYCNSTEEQGTEFVIEIPITQNSSTFTN
>Mature_551_residues
MFQKLDIKSIFFKLLRLPFKLLPSQLITLTVVLTLLLFLPQTWVTWQAYNDFNSIIKNELRLQSLSEKITYYDEVLTMSA
RMNAVTANSVWERRYRQFEPLLDAVIKESIQLAPEVYNNQDAKETDLANKRLVEMEYKSFDLVRKGQALAARSLLLSSQY
ESEKRKYASGVNKINQAIAILIDERVLKYKIYLLWSIGGSVTSLAFLIPSWLLVLRLLKNYLTTSKMAQITLRDLNYELE
MRVEKRAKELRYKNDQLTQTLQKLQQTQLQLIQTEKMSSLGEMVAGIAHEINNPITFVKNNVSYVKEYSQDLLNLIRSYQ
DYYTQPPDIIQVQINEIDLEFIQGDFIKILNSIEYGTDRVEKIVKSLRNFSRLDEAEIKSVDIHEGIDSTLMILSHRLTA
IDKHPEILLIKEYASLPLVECYPGLLNQVFMNILVNAIDALHEYNWQRTDDEIKNSPSRIQICTHQMNESWIQIRIIDNG
IGIPENIRDKLFNPFFTTKPLGKGTGIGLSISYQIIVEKHTGKLYCNSTEEQGTEFVIEIPITQNSSTFTN

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=283, Percent_Identity=28.2685512367491, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1790436, Length=291, Percent_Identity=25.4295532646048, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 63822; Mature: 63822

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKLDIKSIFFKLLRLPFKLLPSQLITLTVVLTLLLFLPQTWVTWQAYNDFNSIIKNEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHH
RLQSLSEKITYYDEVLTMSARMNAVTANSVWERRYRQFEPLLDAVIKESIQLAPEVYNNQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
DAKETDLANKRLVEMEYKSFDLVRKGQALAARSLLLSSQYESEKRKYASGVNKINQAIAI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDERVLKYKIYLLWSIGGSVTSLAFLIPSWLLVLRLLKNYLTTSKMAQITLRDLNYELE
HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MRVEKRAKELRYKNDQLTQTLQKLQQTQLQLIQTEKMSSLGEMVAGIAHEINNPITFVKN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NVSYVKEYSQDLLNLIRSYQDYYTQPPDIIQVQINEIDLEFIQGDFIKILNSIEYGTDRV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHH
EKIVKSLRNFSRLDEAEIKSVDIHEGIDSTLMILSHRLTAIDKHPEILLIKEYASLPLVE
HHHHHHHHHHHHCCHHHHCCEEHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHCCCHHH
CYPGLLNQVFMNILVNAIDALHEYNWQRTDDEIKNSPSRIQICTHQMNESWIQIRIIDNG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEHHHHCCCCEEEEEEEECC
IGIPENIRDKLFNPFFTTKPLGKGTGIGLSISYQIIVEKHTGKLYCNSTEEQGTEFVIEI
CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCEEEEEE
PITQNSSTFTN
EEECCCCCCCC
>Mature Secondary Structure
MFQKLDIKSIFFKLLRLPFKLLPSQLITLTVVLTLLLFLPQTWVTWQAYNDFNSIIKNEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHH
RLQSLSEKITYYDEVLTMSARMNAVTANSVWERRYRQFEPLLDAVIKESIQLAPEVYNNQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
DAKETDLANKRLVEMEYKSFDLVRKGQALAARSLLLSSQYESEKRKYASGVNKINQAIAI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDERVLKYKIYLLWSIGGSVTSLAFLIPSWLLVLRLLKNYLTTSKMAQITLRDLNYELE
HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MRVEKRAKELRYKNDQLTQTLQKLQQTQLQLIQTEKMSSLGEMVAGIAHEINNPITFVKN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NVSYVKEYSQDLLNLIRSYQDYYTQPPDIIQVQINEIDLEFIQGDFIKILNSIEYGTDRV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHH
EKIVKSLRNFSRLDEAEIKSVDIHEGIDSTLMILSHRLTAIDKHPEILLIKEYASLPLVE
HHHHHHHHHHHHCCHHHHCCEEHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHCCCHHH
CYPGLLNQVFMNILVNAIDALHEYNWQRTDDEIKNSPSRIQICTHQMNESWIQIRIIDNG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEHHHHCCCCEEEEEEEECC
IGIPENIRDKLFNPFFTTKPLGKGTGIGLSISYQIIVEKHTGKLYCNSTEEQGTEFVIEI
CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCEEEEEE
PITQNSSTFTN
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]