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The map label for this gene is 75908329

Identifier: 75908329

GI number: 75908329

Start: 2607018

End: 2607737

Strand: Direct

Name: 75908329

Synonym: Ava_2108

Alternate gene names: NA

Gene position: 2607018-2607737 (Clockwise)

Preceding gene: 75908328

Following gene: 75908331

Centisome position: 40.95

GC content: 44.72

Gene sequence:

>720_bases
GTGGTTCCCATTAGAGATAATAATCCTGTAACAATTACGCCTTATGTGACTTATGGGCTAATTGCTGCCAATGTCCTCGC
TTTTTTGTATGAAGCTAGCCTTCCTCCCCAAGCATTAGATGGGTTTTTGCATTTGGCTGCTGTTGTTCCGCGAGAACTGA
GTTTAAGTTTTGCTGGTGTTTCTGTGCATCAACCAGTACCAGAGTGGGCAACTTTGATTACTTCCCAATTTCTGCACGGT
GGCTTTCTGCACCTAGCTGGGAATATGTTGTTCCTATGGATTTTTGGTAACAATGTAGAAGAAAAACTTGGTCATGCCAG
ATATTTGCTGTTTTATCTGGCTTGTGGCGTTTTAGCGTCTTTAACCCAATGGTACTTCTCTCAAGATTCTAGCATTCCTT
CTTTGGGTGCTAGTGGGGCGATCGCTGGTGTGATGGGTGCATACATCCTGCGTTTTCCCAATGCCGAAATTCTCGGTGTA
GTCCCTTTAGGTTTCTTCTTCCCAACTTTCCGTGTTCCTGCATACTTCTTTTTAGGTTTTTGGTTCCTGCAACAATCTTT
TTACGGACTTGCTGGTTTACAAACGCGCACTAACATCGGGATGGAAAGTGGTGGTATTGCCTACTGGGCCCATGCTGGTG
GCTTTATTTTCGGCGCACTCCTGGGGCCCTTGTTGGGTTTATTCAGCGATAAAGCCAAGGAAGAATCTTGGTATAGTTAA

Upstream 100 bases:

>100_bases
CTTGATACCGTTTAACTCATATTCATCCACTGGCTAGAAGAAACTACTAGCAAAATTTACTACTCTGAGTCTAGAGACTG
AAAAATCAGGAAAAACGCCA

Downstream 100 bases:

>100_bases
ATCCCCAATCCCCAATTAATTCAAGGCCAATGTGCGGTCGGAAAATCTGACTCATCTATGGATATGATTGTGTTCATTGA
TGAGTCATTTTGCTGTCCGA

Product: rhomboid-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Membrane-Associated Serine Protease; Cytoplasmic Membrane Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVPIRDNNPVTITPYVTYGLIAANVLAFLYEASLPPQALDGFLHLAAVVPRELSLSFAGVSVHQPVPEWATLITSQFLHG
GFLHLAGNMLFLWIFGNNVEEKLGHARYLLFYLACGVLASLTQWYFSQDSSIPSLGASGAIAGVMGAYILRFPNAEILGV
VPLGFFFPTFRVPAYFFLGFWFLQQSFYGLAGLQTRTNIGMESGGIAYWAHAGGFIFGALLGPLLGLFSDKAKEESWYS

Sequences:

>Translated_239_residues
MVPIRDNNPVTITPYVTYGLIAANVLAFLYEASLPPQALDGFLHLAAVVPRELSLSFAGVSVHQPVPEWATLITSQFLHG
GFLHLAGNMLFLWIFGNNVEEKLGHARYLLFYLACGVLASLTQWYFSQDSSIPSLGASGAIAGVMGAYILRFPNAEILGV
VPLGFFFPTFRVPAYFFLGFWFLQQSFYGLAGLQTRTNIGMESGGIAYWAHAGGFIFGALLGPLLGLFSDKAKEESWYS
>Mature_239_residues
MVPIRDNNPVTITPYVTYGLIAANVLAFLYEASLPPQALDGFLHLAAVVPRELSLSFAGVSVHQPVPEWATLITSQFLHG
GFLHLAGNMLFLWIFGNNVEEKLGHARYLLFYLACGVLASLTQWYFSQDSSIPSLGASGAIAGVMGAYILRFPNAEILGV
VPLGFFFPTFRVPAYFFLGFWFLQQSFYGLAGLQTRTNIGMESGGIAYWAHAGGFIFGALLGPLLGLFSDKAKEESWYS

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=171, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26117; Mature: 26117

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPIRDNNPVTITPYVTYGLIAANVLAFLYEASLPPQALDGFLHLAAVVPRELSLSFAGV
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCEEECCC
SVHQPVPEWATLITSQFLHGGFLHLAGNMLFLWIFGNNVEEKLGHARYLLFYLACGVLAS
CCCCCCHHHHHHHHHHHHHCHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTQWYFSQDSSIPSLGASGAIAGVMGAYILRFPNAEILGVVPLGFFFPTFRVPAYFFLGF
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
WFLQQSFYGLAGLQTRTNIGMESGGIAYWAHAGGFIFGALLGPLLGLFSDKAKEESWYS
HHHHHHHHHHHCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVPIRDNNPVTITPYVTYGLIAANVLAFLYEASLPPQALDGFLHLAAVVPRELSLSFAGV
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCEEECCC
SVHQPVPEWATLITSQFLHGGFLHLAGNMLFLWIFGNNVEEKLGHARYLLFYLACGVLAS
CCCCCCHHHHHHHHHHHHHCHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTQWYFSQDSSIPSLGASGAIAGVMGAYILRFPNAEILGVVPLGFFFPTFRVPAYFFLGF
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
WFLQQSFYGLAGLQTRTNIGMESGGIAYWAHAGGFIFGALLGPLLGLFSDKAKEESWYS
HHHHHHHHHHHCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA