Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908233

Identifier: 75908233

GI number: 75908233

Start: 2494129

End: 2494527

Strand: Direct

Name: 75908233

Synonym: Ava_2012

Alternate gene names: NA

Gene position: 2494129-2494527 (Clockwise)

Preceding gene: 75908232

Following gene: 75908237

Centisome position: 39.18

GC content: 38.85

Gene sequence:

>399_bases
ATGATGGAAGCAGAACAAAAATCAGCACGTTCTCTAGCTGAGTGGGTAACATTCGGTATTGCTTTGTTTATCCTCGGAAT
TATTATGAGCTTAGTAGCTTATCTTTGGCTACATGAGGAAAATAAACCCCCCGTTTTATCTGTTACGAAAAAACAAGTAA
TGCGGGAAGTTAACGGACAATTTTACGTTCCATTCGAGATAGTAAATACTGGTGGCGAAACTGCTGAATCAGTACAAATT
ATTGCTGAATTACAAATTACTGGTGAAGTTGTGGAAACAGGAGAACAACAAATTGACTTCTTATCTGACGGTGAGAAGGA
GGAGGGTACATTTATCTTTAGCCAAAACCCCCGTCAAGGAAAACTAATTGTGCGTGTTGCTAGCTATAAGTTGCCATAA

Upstream 100 bases:

>100_bases
AAAAAGTAACATTTGCAGACCCTTGGAGAATGTGGCTAGAACATACTTTAGTTTTAGGTTTACCTGCAACAATTGGTGGT
GCTGCTGGTAGGTTAGCAAT

Downstream 100 bases:

>100_bases
TTAAAAAGCAAAACAAAACCCTAACCACAAATGGTTAGGGTTTCAGTTAAATATTATATACGCCTTATAATCTAGGCTTT
ATCAATCGGAGCGGCGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MMEAEQKSARSLAEWVTFGIALFILGIIMSLVAYLWLHEENKPPVLSVTKKQVMREVNGQFYVPFEIVNTGGETAESVQI
IAELQITGEVVETGEQQIDFLSDGEKEEGTFIFSQNPRQGKLIVRVASYKLP

Sequences:

>Translated_132_residues
MMEAEQKSARSLAEWVTFGIALFILGIIMSLVAYLWLHEENKPPVLSVTKKQVMREVNGQFYVPFEIVNTGGETAESVQI
IAELQITGEVVETGEQQIDFLSDGEKEEGTFIFSQNPRQGKLIVRVASYKLP
>Mature_132_residues
MMEAEQKSARSLAEWVTFGIALFILGIIMSLVAYLWLHEENKPPVLSVTKKQVMREVNGQFYVPFEIVNTGGETAESVQI
IAELQITGEVVETGEQQIDFLSDGEKEEGTFIFSQNPRQGKLIVRVASYKLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14807; Mature: 14807

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEAEQKSARSLAEWVTFGIALFILGIIMSLVAYLWLHEENKPPVLSVTKKQVMREVNGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCC
FYVPFEIVNTGGETAESVQIIAELQITGEVVETGEQQIDFLSDGEKEEGTFIFSQNPRQG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCC
KLIVRVASYKLP
EEEEEEECCCCC
>Mature Secondary Structure
MMEAEQKSARSLAEWVTFGIALFILGIIMSLVAYLWLHEENKPPVLSVTKKQVMREVNGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCC
FYVPFEIVNTGGETAESVQIIAELQITGEVVETGEQQIDFLSDGEKEEGTFIFSQNPRQG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCC
KLIVRVASYKLP
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA