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The map label for this gene is xylB [H]

Identifier: 75908227

GI number: 75908227

Start: 2488306

End: 2489547

Strand: Direct

Name: xylB [H]

Synonym: Ava_2006

Alternate gene names: 75908227

Gene position: 2488306-2489547 (Clockwise)

Preceding gene: 75908225

Following gene: 75908230

Centisome position: 39.09

GC content: 45.09

Gene sequence:

>1242_bases
ATGGATTTTTATTTGGGGATAGACTTTGGTACGTCCGGTGCTAGGGCTGTGGTAATTGATGAATCAGCCCATATCCAGGT
GCAGGTGCGTTATCCTTGGCTAGAGGTTGATTCCCTAGTCTCTAGTTGGCAAAAGGCGTTGTTGACGCTGCTGGGACAAA
TTCCCGAACAGTTGCGGCGAGAAATAAAAGCGATCGCAATTAACGGTACTTCCTCTACAGTTTTATTATGCGATGCAAAT
GGCAACCCTGTAGATACTCCTTTACTCTACAACGATGGGCGGGGATCAATAGTACTAAATGAGTTGAGAGATATCGCACC
AGCAAATCATACTGTTTTAAGTGCTACCTCCAGCTTGGCTAAATTGCGCTGGATGATGCAGTTACCCTCTTTTGGCGAAG
CACGATATTTTCTGCACCAAGCCGACTGGTTAGGGTTTCTCCTACATGGAAAGTTGGGAATCAGCGACTACCACAATGCT
TTAAAGCTGGGTTATGACGTGGAAAAGTTGCAATACCCCGAATGGTTAGAAAGTCTGCAACTACCGATTCATTTACCCAA
AGTTTTACCCCCTGGGACTCCCATTGGTGAAGTAAGTCCCGAAATTTCCCAACAGTTTTTATTACCTCCAGACTGCTTGG
TATGTGCGGGGACAACAGATAGTATTGCAGCATTTCTGGCGAGTGGGGCAAAATCCCCAGGGGAAGCGGTGACTTCCCTT
GGTTCGACATTAGTACTCAAACTTTTGAGTCACACCCCTGTAGAAGATGTACGATATGGAATTTATAGCCATCGCCTTGG
TGATTTGTGGCTAACCGGTGGCGCATCAAATACGGGGGGTGCAGTATTACGGGAATTTTTCACTGATGCTGAGTTAGAAA
ACTTGAGTCGTGAAATTGATGCCACAAAAGCCAGCGAATTAGATTATTATCCCTTGTTGAAAGTAGGGGAACGCTTTCCT
ATCAATGATCCCAATTTACCCCCACGCCTCACACCACGCCCAGAGAATCCAGCAGAATTTTTACATGGCTTATTAGAAAG
TATCGCCCGTATAGAAACCCAAGGATATGAACTATTACAAAAATTGGGTGCAGATAGCTTAAATCAAGTTTATACAGCCG
GTGGCGGCGCAAAAAACCCCACATGGAATGCAATTCGGCAAAGAAACTTAAAAGTTCCCGTCATTTCTTCACTTAATACA
GAAGCCGCCTATGGTTCAGCATTGCTGGCGATGGGAAGATAA

Upstream 100 bases:

>100_bases
TGTTTTGCCAGAAATATGGAATATCTTGTTACAAGATGCAACAAAAGCACTTGTTAGTCAGTAGTCTTAGTTATCTTTCA
TTAAAAAAATTTATAAAAAT

Downstream 100 bases:

>100_bases
GAGAAAAACTCCTCCTTCTCTCCCTGTCTCTGCGTGAATCAATCACACCATCATTCCCTCATCGGATATTCAGTATGATT
TGTTCATAAATATCGTCTAA

Product: carbohydrate kinase FGGY

Products: ADP; H+; D-Xylulose 5-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIKAIAINGTSSTVLLCDAN
GNPVDTPLLYNDGRGSIVLNELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGKLGISDYHNA
LKLGYDVEKLQYPEWLESLQLPIHLPKVLPPGTPIGEVSPEISQQFLLPPDCLVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTPVEDVRYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREIDATKASELDYYPLLKVGERFP
INDPNLPPRLTPRPENPAEFLHGLLESIARIETQGYELLQKLGADSLNQVYTAGGGAKNPTWNAIRQRNLKVPVISSLNT
EAAYGSALLAMGR

Sequences:

>Translated_413_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIKAIAINGTSSTVLLCDAN
GNPVDTPLLYNDGRGSIVLNELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGKLGISDYHNA
LKLGYDVEKLQYPEWLESLQLPIHLPKVLPPGTPIGEVSPEISQQFLLPPDCLVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTPVEDVRYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREIDATKASELDYYPLLKVGERFP
INDPNLPPRLTPRPENPAEFLHGLLESIARIETQGYELLQKLGADSLNQVYTAGGGAKNPTWNAIRQRNLKVPVISSLNT
EAAYGSALLAMGR
>Mature_413_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIKAIAINGTSSTVLLCDAN
GNPVDTPLLYNDGRGSIVLNELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGKLGISDYHNA
LKLGYDVEKLQYPEWLESLQLPIHLPKVLPPGTPIGEVSPEISQQFLLPPDCLVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTPVEDVRYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREIDATKASELDYYPLLKVGERFP
INDPNLPPRLTPRPENPAEFLHGLLESIARIETQGYELLQKLGADSLNQVYTAGGGAKNPTWNAIRQRNLKVPVISSLNT
EAAYGSALLAMGR

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17 [C]

Molecular weight: Translated: 45093; Mature: 45093

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRR
CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIKAIAINGTSSTVLLCDANGNPVDTPLLYNDGRGSIVLNELRDIAPANHTVLSATSSLA
HHHEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEHHHHHHCCCCCCHHHHHHHHHH
KLRWMMQLPSFGEARYFLHQADWLGFLLHGKLGISDYHNALKLGYDVEKLQYPEWLESLQ
HHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCHHHCCCHHHHHHCC
LPIHLPKVLPPGTPIGEVSPEISQQFLLPPDCLVCAGTTDSIAAFLASGAKSPGEAVTSL
CCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHH
GSTLVLKLLSHTPVEDVRYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREID
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
ATKASELDYYPLLKVGERFPINDPNLPPRLTPRPENPAEFLHGLLESIARIETQGYELLQ
CCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGADSLNQVYTAGGGAKNPTWNAIRQRNLKVPVISSLNTEAAYGSALLAMGR
HHCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCEECCCCCCHHHCHHHHCCCC
>Mature Secondary Structure
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRR
CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIKAIAINGTSSTVLLCDANGNPVDTPLLYNDGRGSIVLNELRDIAPANHTVLSATSSLA
HHHEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEHHHHHHCCCCCCHHHHHHHHHH
KLRWMMQLPSFGEARYFLHQADWLGFLLHGKLGISDYHNALKLGYDVEKLQYPEWLESLQ
HHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCHHHCCCHHHHHHCC
LPIHLPKVLPPGTPIGEVSPEISQQFLLPPDCLVCAGTTDSIAAFLASGAKSPGEAVTSL
CCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHH
GSTLVLKLLSHTPVEDVRYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREID
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
ATKASELDYYPLLKVGERFPINDPNLPPRLTPRPENPAEFLHGLLESIARIETQGYELLQ
CCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGADSLNQVYTAGGGAKNPTWNAIRQRNLKVPVISSLNTEAAYGSALLAMGR
HHCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCEECCCCCCHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-Xylulose [C]

Specific reaction: ATP + D-Xylulose --> ADP + H+ + D-Xylulose 5-phosphate [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA