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The map label for this gene is nlpI [C]

Identifier: 75908225

GI number: 75908225

Start: 2486012

End: 2486722

Strand: Direct

Name: nlpI [C]

Synonym: Ava_2004

Alternate gene names: 75908225

Gene position: 2486012-2486722 (Clockwise)

Preceding gene: 75908222

Following gene: 75908227

Centisome position: 39.05

GC content: 45.71

Gene sequence:

>711_bases
ATGAACAGTCACTCATTTTTAGCCTCTGGTGATCAGCAGAATAACTGTTACCAATTTATTGCTAAGACTAAACTGGACCC
TCAAGAAAATGGGGCTAGGGGTGATGAGTCGGGGTTCGGTGATGGCTACTTACGCTCTTGTGCTTTGAGATCAGCGCAAC
AGGGAAATTATAGCGAAGCGATCGCTCTCCTGAACCAATTGATTAACCGCCATCCTGACAACGCGGTTGACTACAACAAC
CGGGGGTTAATCTATTTTCAATGTGGACATACTCAAAAGGCAATACAAGATTACAACACCGCATTACATTTGAATCCTGA
TTTAGCCAGCGCTTACAACAATCGCGCCAATTATTACGCAGCTTGTGGACAACTAGCAGCCGCTCTGGCTGATTACGATC
GCGCTATTGATTTAAATCCTCGTCATGTGCGAGCCTGGATTAATCGTGGCATTACTCTACGCGATTTGGGCGAATATGAC
CAAGCAATTGAGAATTTTGATATTGCCCTGGTTTTTGGTCAGCTAGAGGGGCATATCTGGGCTGAACGTGGTAGAACTTA
CCATCTTTGGGGTGATTGGAATTGTGCGATCGCCGACTATCGTCGTGCCGAAACTCAATTACCTTCGTTACATGGTCGCA
GAGATGTTCCTGGCTACCGTTTGCGGCTACAAATGGAAAATTGGTTAAATGAATTGCTGCCTTCGGCGTAA

Upstream 100 bases:

>100_bases
GTCTGTATCAGGTGTGCTTGTTGGCAAGAAAATTTCCGCAACAAGCTACCACCACAACTCTAATTTAATTTCTCAGACTA
AGCAGCGAAGGTAGGAAAAC

Downstream 100 bases:

>100_bases
TTAGTCGGTTGTCAATATAAGAGACGTTGTATACAACATCTGTACATTAATTCTTTCCCCTATCCCCTGCCTAATCAGCA
GTACAACCCTGTATTTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNSHSFLASGDQQNNCYQFIAKTKLDPQENGARGDESGFGDGYLRSCALRSAQQGNYSEAIALLNQLINRHPDNAVDYNN
RGLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYAACGQLAAALADYDRAIDLNPRHVRAWINRGITLRDLGEYD
QAIENFDIALVFGQLEGHIWAERGRTYHLWGDWNCAIADYRRAETQLPSLHGRRDVPGYRLRLQMENWLNELLPSA

Sequences:

>Translated_236_residues
MNSHSFLASGDQQNNCYQFIAKTKLDPQENGARGDESGFGDGYLRSCALRSAQQGNYSEAIALLNQLINRHPDNAVDYNN
RGLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYAACGQLAAALADYDRAIDLNPRHVRAWINRGITLRDLGEYD
QAIENFDIALVFGQLEGHIWAERGRTYHLWGDWNCAIADYRRAETQLPSLHGRRDVPGYRLRLQMENWLNELLPSA
>Mature_236_residues
MNSHSFLASGDQQNNCYQFIAKTKLDPQENGARGDESGFGDGYLRSCALRSAQQGNYSEAIALLNQLINRHPDNAVDYNN
RGLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYAACGQLAAALADYDRAIDLNPRHVRAWINRGITLRDLGEYD
QAIENFDIALVFGQLEGHIWAERGRTYHLWGDWNCAIADYRRAETQLPSLHGRRDVPGYRLRLQMENWLNELLPSA

Specific function: May Be Involved In Cell Division. Overexpression Of Nlpi Results In The Loss Of The Rod Morphology And The Formation Of Single Prolate Ellipsoids And Pairs Of Prolate Ellipsoids Joined By Partial Constrictions. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Caenorhabditis elegans, GI115532690, Length=168, Percent_Identity=27.3809523809524, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=168, Percent_Identity=27.3809523809524, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 26781; Mature: 26781

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHSFLASGDQQNNCYQFIAKTKLDPQENGARGDESGFGDGYLRSCALRSAQQGNYSEA
CCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
IALLNQLINRHPDNAVDYNNRGLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYA
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEECCHHHHHHCCCCHHHH
ACGQLAAALADYDRAIDLNPRHVRAWINRGITLRDLGEYDQAIENFDIALVFGQLEGHIW
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECCCCEEE
AERGRTYHLWGDWNCAIADYRRAETQLPSLHGRRDVPGYRLRLQMENWLNELLPSA
ECCCCEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MNSHSFLASGDQQNNCYQFIAKTKLDPQENGARGDESGFGDGYLRSCALRSAQQGNYSEA
CCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
IALLNQLINRHPDNAVDYNNRGLIYFQCGHTQKAIQDYNTALHLNPDLASAYNNRANYYA
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEECCHHHHHHCCCCHHHH
ACGQLAAALADYDRAIDLNPRHVRAWINRGITLRDLGEYDQAIENFDIALVFGQLEGHIW
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECCCCEEE
AERGRTYHLWGDWNCAIADYRRAETQLPSLHGRRDVPGYRLRLQMENWLNELLPSA
ECCCCEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]