Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908164

Identifier: 75908164

GI number: 75908164

Start: 2417779

End: 2418489

Strand: Direct

Name: 75908164

Synonym: Ava_1943

Alternate gene names: NA

Gene position: 2417779-2418489 (Clockwise)

Preceding gene: 75908163

Following gene: 75908165

Centisome position: 37.98

GC content: 39.94

Gene sequence:

>711_bases
ATGACTAACTCCAGTTTTACGAAAGGAAAAAATTCATATCACCACCAAGCGGAAGAACCGCATTTACCGACCAAAATACA
GATAAAAAATGGTAGCAAACATGAAGTTTCTAGGCAGCGAGAACCTAGAAATGATGTATCTATTACTAATGACTTAAATC
GGGGTCGAGTAGCTATTTTCATCGATGGTGCTAATCTATTTCAAGCCGCTTTACAACTTGGTATCGAAATCGATTACCTC
AAATTACTTTGCCGTTTAACTGCGGGTTCTAGATTATTACGGGCATTTTTCTACACCGGAGTTGATATGTCTCGACCAAC
TCCTACACGTCAACGCACCAATGATAAGCAACAAGGTTTTCTATTTTGGATGCGCCGTAACGGTTATCGTGTTGTCACCA
AAGAACTCCAAGTTACAGATAACAACAAAAAACCAAATTTGAACGTAGAAATTGCTGTAGACATGATCACCTTAGCACCT
CATTATGATACAGCTGTCTTGGTGAGTGGTGATGGTGATTTAGCATACGCAGTCAACGCAGTCAGCAGCACCGGAGTTCG
TGTAGAAGTCGTCAGTTTACGAACCATGACTAACGACTGTTTAATTGATGTCGCCGACTACTTTATTGACCTCGATAGCA
TTAAACAATATATCCAAAAGGATTCCCATCTAGGATATGGCTATCGGACGCTATCTAATTCTAATCTTTAA

Upstream 100 bases:

>100_bases
GTGACTGAATATCATTTATTGTTTTGCTGATTGCTCAGCACAGATGGTCTATTGTCTATTACCTCAAACGCTTCGCCAGA
TTTAAAATCCAGAGGACTCA

Downstream 100 bases:

>100_bases
AATATAAAGGTTGGTTGAGTTAATACTCAATATGGTTAAGTGAAAGATAATTTCACCAGATTTGGATAAAAGCTATTGAG
AAAGGATGCACTTGATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYL
KLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAP
HYDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL

Sequences:

>Translated_236_residues
MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYL
KLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAP
HYDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL
>Mature_235_residues
TNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYLK
LLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPH
YDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26675; Mature: 26543

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIF
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCCCCEEEEE
IDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGF
EECHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCE
LFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPHYDTAVLVSGDGDLAYAVNA
EEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEEEC
VSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL
CCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCC
>Mature Secondary Structure 
TNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIF
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCCCCEEEEE
IDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGF
EECHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCE
LFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPHYDTAVLVSGDGDLAYAVNA
EEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEEEC
VSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL
CCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA