| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908157
Identifier: 75908157
GI number: 75908157
Start: 2406729
End: 2407283
Strand: Direct
Name: 75908157
Synonym: Ava_1936
Alternate gene names: NA
Gene position: 2406729-2407283 (Clockwise)
Preceding gene: 75908155
Following gene: 75908160
Centisome position: 37.81
GC content: 41.62
Gene sequence:
>555_bases ATGGCTAAAGTTTTTGACCACATCACCAAAGAATTACAAGAATTTATTGCAGCCCAACACCTGTTTTTTGTAGCTTCTGC ACCCCTGAGTCCTGATGGCCATGTGAATATGTCTCCCAAAGGACTAGACTGCTTTCGGATTCTTTCCCCTCATCAGGTAG CTTACCTAGATTTAACAGGTAGTGGTAATGAAACCTCAGCCCATCTCCAAGAAAACGGGCGAATCACCTTAATGTTTTGC GCTTTTGAAGGAGCGCCTCTAATTTTACGCCTCTATGGAAAAGGAGAGACAATTTTACCCAGTTCCCCTAATTGGGATTC CTTGTACTCATTATTTCCTCCAATCCCTGGAACTCGGCAAATTATAGTTGCAGATATCGAACGTGTGCAAACTTCTTGTG GTCTTGGTGTCCCACTGTATGAATATCAAGGACAAAGACAGGCTTTAGTTGATTGGGCAGAGAAAAAAGGAGTACAAGGA GTTAATGACTATCGAAAGCAAAAAAATGTTGTGAGTATCGATGGTTTACCGACTCCACTCAGCAAATTATTTTAA
Upstream 100 bases:
>100_bases GCAGGGCAGAGTACGGGTACTCCTGCGGAGAACTCGTAGAGTAGCAAGCTATAAAGAGGGGTTTCTAGAATCATTTACCA GCACTTAATACTTACTATTT
Downstream 100 bases:
>100_bases GCAGCCTGAGAAAATTTCAGTAAATATGTAGGTTCTTTTGCTACAAAGATGATCTTTGTCATAAATTAAGTAATTGCCGA AAACAGAAAGCATTTACAAC
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFC AFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQG VNDYRKQKNVVSIDGLPTPLSKLF
Sequences:
>Translated_184_residues MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFC AFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQG VNDYRKQKNVVSIDGLPTPLSKLF >Mature_183_residues AKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFCA FEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGV NDYRKQKNVVSIDGLPTPLSKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20345; Mature: 20213
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTG CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCCCEEEEEEEEC SGNETSAHLQENGRITLMFCAFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQ CCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCE IIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGVNDYRKQKNVVSIDGLPTPL EEEHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCH SKLF HHCC >Mature Secondary Structure AKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTG CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCCCEEEEEEEEC SGNETSAHLQENGRITLMFCAFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQ CCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCE IIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGVNDYRKQKNVVSIDGLPTPL EEEHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCH SKLF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA