| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908103
Identifier: 75908103
GI number: 75908103
Start: 2335095
End: 2336381
Strand: Direct
Name: 75908103
Synonym: Ava_1882
Alternate gene names: NA
Gene position: 2335095-2336381 (Clockwise)
Preceding gene: 75908102
Following gene: 75908104
Centisome position: 36.68
GC content: 39.86
Gene sequence:
>1287_bases ATGACTAAAAATCCAGTCAGAAATATTTGCTTGGTCGTGGTTACTGCTTTGACCTTCACCGCAGTGTCTTCAGGGGAAAT CGGCAAAGCGCAAATATCAGGCAAAACCTACTACGTAGACCAAGGTACTGGGAGTGATTATAACTCTGGCACAACGCAAA CATCTGCATTTAAGACGATAAACAAAGCTAATCAAATAGTAGCGGCTGGTGATACGATCTACGTAAAAAACGGAACCTAT CAAGAAAATATTACAGTCAAGAAGTCGGGAACACCAGATAAATGGATATCATTGCAGGCTTATCCAGGACAAACCCCGAA AGTAAGAGGAACTCAAGATGGCAGTATTAGCGTAGAGGGGAGTTACGTCAAAGTTATTGGTTTTGATGTGACTTCAAGCG GAGAAGGGTCTGCTATTAATGTTGGTAGAGGCAACCATCACGTACACATCATTCGCAATATAGTCCATGATTCTGGATGT GGTGGTATTTCTGCTCAAGAAACAGACTATTTAACCATTGAAGAGAACATTTCTTATCGCAATGCCTTCCGGTCTGGGTA TATGTGTTCGGGAATTTCTATTTATCAAGCCAAAGCCTTTGATGATGCCCCTGGATTTCACAACATCATTAGGGGGAATA TTTCTTACGCTAATGAAAATAAAGTTACCACATCTTGGGGAGGGAGAAGTTTTGTTACCGATGGTAATGGAATTATTATC GACGATTTTAGGCAAACACAAAGCCAGAGATTTAGACCACGGTACACACCTTGGACTTTAATTGAAAACAACATTGTTTT TAACAACGGTGGCAGAGGCATCCATATCTATGAAAGCGACAATGTAGTAGTCAGGAATAATACAGCTTTCAAAAACTTAA GGTCTGGGAATTTAGATGGTCACCTAAATGGTGAACTAACTACGTATTTCTCCAGTAATATCCACTTTTACAATAACATA GCCTATTCCAGTAGTCTAAATAAGAAAACATTTGTGGATGATTATTCATCGAAAAATCGGTGGGACAATAACTTGTCATA CATTGGTTCTACTCTGGTTAACGATGGACATTCTGATGTTAAATTGGGTGCAAATAACCGCATCAACGTTAATCCTCTAT TTATCAATGCTTCTACTGACCCTAAACTAGCCAACTTCCGACTTAATCTTGGTAGTCCAGCCATTGATTCAGGTACTACA CAAAGTGCAGCTAGTGTTGATTTTGACAAGAATGCAAGACCTTTTGGCGTAGGGCCTGACATGGGTGCATTTGAGTTACG CAGATAA
Upstream 100 bases:
>100_bases ACTTTTGGCTTTAAATCCTTCTTCCTGACTTCGAGTTAAATTTGTCAGCTAGTCAGGAACAGGCTTGTCTATCAGTCACA TTATTTCACCTAAAATTGTC
Downstream 100 bases:
>100_bases TTTTTAACAGGACGGCTAATTTAGCTAAAACCGACAGAAGCCCCACGCCTGACCCGATAGGGCAGCGTGGGATGAATGGA GGAGTCGCCAAACCTTTGAT
Product: parallel beta-helix repeat-containing protein
Products: NA
Alternate protein names: S-Layer Domain-Containing Protein; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTKNPVRNICLVVVTALTFTAVSSGEIGKAQISGKTYYVDQGTGSDYNSGTTQTSAFKTINKANQIVAAGDTIYVKNGTY QENITVKKSGTPDKWISLQAYPGQTPKVRGTQDGSISVEGSYVKVIGFDVTSSGEGSAINVGRGNHHVHIIRNIVHDSGC GGISAQETDYLTIEENISYRNAFRSGYMCSGISIYQAKAFDDAPGFHNIIRGNISYANENKVTTSWGGRSFVTDGNGIII DDFRQTQSQRFRPRYTPWTLIENNIVFNNGGRGIHIYESDNVVVRNNTAFKNLRSGNLDGHLNGELTTYFSSNIHFYNNI AYSSSLNKKTFVDDYSSKNRWDNNLSYIGSTLVNDGHSDVKLGANNRINVNPLFINASTDPKLANFRLNLGSPAIDSGTT QSAASVDFDKNARPFGVGPDMGAFELRR
Sequences:
>Translated_428_residues MTKNPVRNICLVVVTALTFTAVSSGEIGKAQISGKTYYVDQGTGSDYNSGTTQTSAFKTINKANQIVAAGDTIYVKNGTY QENITVKKSGTPDKWISLQAYPGQTPKVRGTQDGSISVEGSYVKVIGFDVTSSGEGSAINVGRGNHHVHIIRNIVHDSGC GGISAQETDYLTIEENISYRNAFRSGYMCSGISIYQAKAFDDAPGFHNIIRGNISYANENKVTTSWGGRSFVTDGNGIII DDFRQTQSQRFRPRYTPWTLIENNIVFNNGGRGIHIYESDNVVVRNNTAFKNLRSGNLDGHLNGELTTYFSSNIHFYNNI AYSSSLNKKTFVDDYSSKNRWDNNLSYIGSTLVNDGHSDVKLGANNRINVNPLFINASTDPKLANFRLNLGSPAIDSGTT QSAASVDFDKNARPFGVGPDMGAFELRR >Mature_427_residues TKNPVRNICLVVVTALTFTAVSSGEIGKAQISGKTYYVDQGTGSDYNSGTTQTSAFKTINKANQIVAAGDTIYVKNGTYQ ENITVKKSGTPDKWISLQAYPGQTPKVRGTQDGSISVEGSYVKVIGFDVTSSGEGSAINVGRGNHHVHIIRNIVHDSGCG GISAQETDYLTIEENISYRNAFRSGYMCSGISIYQAKAFDDAPGFHNIIRGNISYANENKVTTSWGGRSFVTDGNGIIID DFRQTQSQRFRPRYTPWTLIENNIVFNNGGRGIHIYESDNVVVRNNTAFKNLRSGNLDGHLNGELTTYFSSNIHFYNNIA YSSSLNKKTFVDDYSSKNRWDNNLSYIGSTLVNDGHSDVKLGANNRINVNPLFINASTDPKLANFRLNLGSPAIDSGTTQ SAASVDFDKNARPFGVGPDMGAFELRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46742; Mature: 46611
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNPVRNICLVVVTALTFTAVSSGEIGKAQISGKTYYVDQGTGSDYNSGTTQTSAFKTI CCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHH NKANQIVAAGDTIYVKNGTYQENITVKKSGTPDKWISLQAYPGQTPKVRGTQDGSISVEG HHCCEEEEECCEEEEECCCEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECC SYVKVIGFDVTSSGEGSAINVGRGNHHVHIIRNIVHDSGCGGISAQETDYLTIEENISYR CEEEEEEEEEECCCCCCEEEECCCCCEEEEEEEHHHCCCCCCCCCCCCEEEEEECCCCHH NAFRSGYMCSGISIYQAKAFDDAPGFHNIIRGNISYANENKVTTSWGGRSFVTDGNGIII HHHCCCCEECCEEEEEEECCCCCCCHHHHEECCEEECCCCEEEECCCCEEEEECCCCEEE DDFRQTQSQRFRPRYTPWTLIENNIVFNNGGRGIHIYESDNVVVRNNTAFKNLRSGNLDG ECHHHHHHHHCCCCCCCEEEEECCEEECCCCCEEEEEECCCEEEECCCHHHHCCCCCCCC HLNGELTTYFSSNIHFYNNIAYSSSLNKKTFVDDYSSKNRWDNNLSYIGSTLVNDGHSDV EECCEEEEEEECCEEEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCE KLGANNRINVNPLFINASTDPKLANFRLNLGSPAIDSGTTQSAASVDFDKNARPFGVGPD EECCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCC MGAFELRR CCCCCCCC >Mature Secondary Structure TKNPVRNICLVVVTALTFTAVSSGEIGKAQISGKTYYVDQGTGSDYNSGTTQTSAFKTI CCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHH NKANQIVAAGDTIYVKNGTYQENITVKKSGTPDKWISLQAYPGQTPKVRGTQDGSISVEG HHCCEEEEECCEEEEECCCEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECC SYVKVIGFDVTSSGEGSAINVGRGNHHVHIIRNIVHDSGCGGISAQETDYLTIEENISYR CEEEEEEEEEECCCCCCEEEECCCCCEEEEEEEHHHCCCCCCCCCCCCEEEEEECCCCHH NAFRSGYMCSGISIYQAKAFDDAPGFHNIIRGNISYANENKVTTSWGGRSFVTDGNGIII HHHCCCCEECCEEEEEEECCCCCCCHHHHEECCEEECCCCEEEECCCCEEEEECCCCEEE DDFRQTQSQRFRPRYTPWTLIENNIVFNNGGRGIHIYESDNVVVRNNTAFKNLRSGNLDG ECHHHHHHHHCCCCCCCEEEEECCEEECCCCCEEEEEECCCEEEECCCHHHHCCCCCCCC HLNGELTTYFSSNIHFYNNIAYSSSLNKKTFVDDYSSKNRWDNNLSYIGSTLVNDGHSDV EECCEEEEEEECCEEEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCE KLGANNRINVNPLFINASTDPKLANFRLNLGSPAIDSGTTQSAASVDFDKNARPFGVGPD EECCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCC MGAFELRR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA