Click here to switch to the map view.

The map label for this gene is yqgC [H]

Identifier: 75908102

GI number: 75908102

Start: 2332863

End: 2333381

Strand: Direct

Name: yqgC [H]

Synonym: Ava_1881

Alternate gene names: 75908102

Gene position: 2332863-2333381 (Clockwise)

Preceding gene: 75908101

Following gene: 75908103

Centisome position: 36.65

GC content: 40.46

Gene sequence:

>519_bases
ATGCAAATTCTCTATTGGCTACTTATTGCCTTAATGCTTGTAGGTGTTGTTGGTGCAGTAGTTCCTGCTATCCCTGGAAC
CAGTTTAATTTTAATTGCCATTATCATTTGGGGAATTGTGAGTAGTTCTTTTGCCGCGATTAAAATTCCCTTGATTGTGA
CAGTTATTGTCTTGATTTTGAGTATTGGTGTTGATTTTTTAGCTGGGTACTTGGGTGCAAAACAAGCAGGTGCTAGCAAG
TGGGGTCAAATTGGCGCATTTGTAGGTTTGTTGCTAGGATTTTTCGGATTATTACCCGCTTTACCTTTTGGCGGCCCACT
GTTGGGGATTTTATTCGGGCCGTTGGTAGGTGCGATTATTGGTGAGTATATTTACCAAAGGGAATTTTGGTTGGCTGTGA
AAGCTGGTATTGGTATTGTTGTCGGTACGTTGGTAGGAAATTTAATACAAGGGGTTTTGGCGATCGCTACAGTTGCAGTA
TTTTTATTTACAACCTGGCCACAAGTATTTGGTAATTAA

Upstream 100 bases:

>100_bases
CTTTTCGCACTTGGGTAAGACAGCAAATCTCTGCGGCTCAACCACCCGTACTTTAACATACCTTACCTGAAAATTATTAC
AGATTTACGATTTACAAATT

Downstream 100 bases:

>100_bases
AATTATCATCAATGTCATTTGATAATCTCTGCAAGCTGTTGTCAGAAAAATATCCCGTTAACTTTGCTAGTTGGGTTCTT
GGAACACCTCAAACAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQILYWLLIALMLVGVVGAVVPAIPGTSLILIAIIIWGIVSSSFAAIKIPLIVTVIVLILSIGVDFLAGYLGAKQAGASK
WGQIGAFVGLLLGFFGLLPALPFGGPLLGILFGPLVGAIIGEYIYQREFWLAVKAGIGIVVGTLVGNLIQGVLAIATVAV
FLFTTWPQVFGN

Sequences:

>Translated_172_residues
MQILYWLLIALMLVGVVGAVVPAIPGTSLILIAIIIWGIVSSSFAAIKIPLIVTVIVLILSIGVDFLAGYLGAKQAGASK
WGQIGAFVGLLLGFFGLLPALPFGGPLLGILFGPLVGAIIGEYIYQREFWLAVKAGIGIVVGTLVGNLIQGVLAIATVAV
FLFTTWPQVFGN
>Mature_172_residues
MQILYWLLIALMLVGVVGAVVPAIPGTSLILIAIIIWGIVSSSFAAIKIPLIVTVIVLILSIGVDFLAGYLGAKQAGASK
WGQIGAFVGLLLGFFGLLPALPFGGPLLGILFGPLVGAIIGEYIYQREFWLAVKAGIGIVVGTLVGNLIQGVLAIATVAV
FLFTTWPQVFGN

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007403 [H]

Pfam domain/function: PF04306 DUF456 [H]

EC number: NA

Molecular weight: Translated: 17888; Mature: 17888

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILYWLLIALMLVGVVGAVVPAIPGTSLILIAIIIWGIVSSSFAAIKIPLIVTVIVLIL
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SIGVDFLAGYLGAKQAGASKWGQIGAFVGLLLGFFGLLPALPFGGPLLGILFGPLVGAII
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GEYIYQREFWLAVKAGIGIVVGTLVGNLIQGVLAIATVAVFLFTTWPQVFGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQILYWLLIALMLVGVVGAVVPAIPGTSLILIAIIIWGIVSSSFAAIKIPLIVTVIVLIL
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SIGVDFLAGYLGAKQAGASKWGQIGAFVGLLLGFFGLLPALPFGGPLLGILFGPLVGAII
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GEYIYQREFWLAVKAGIGIVVGTLVGNLIQGVLAIATVAVFLFTTWPQVFGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]