| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908083
Identifier: 75908083
GI number: 75908083
Start: 2314675
End: 2315517
Strand: Direct
Name: 75908083
Synonym: Ava_1862
Alternate gene names: NA
Gene position: 2314675-2315517 (Clockwise)
Preceding gene: 75908082
Following gene: 75908084
Centisome position: 36.36
GC content: 38.67
Gene sequence:
>843_bases GTGCAAACAGACAAGATATTCTACAGCTTATTTCAAGCTTTCACCAGCATATTTTTTGCAATTATTGGGGAAGCAGATAT TAATCCCAGTACCTATGAGTTTGTCTCGGTGGAACTGAAAGAAACTGCTTTTCGTATTGATGGGGTATTTAAACCTGTAA ATGAAACTACAGAAGAACCCCTATATTTTGTTGAAGTTCAGTTTCAACTAGATCCTAAATTTTATAGGCGCTTCTTTGCC GAAATCTTTCTTTATCTCCGTCAAAACCCATCTGTTAACTTTTGGCGTGCTGTTGTCATTTATCCCCAACGCATCATAGA ACCGGATGATCAACAACCTTATCGCTCGATTTTGGATAGTTCCCAAATACAACGCATTTATTTAGATGAGTTAGGAACGG CTAACGAAAACTCTCTACAATTAGCGATCATGCAACTAATTATTGCCAGTGAAGCAATAGCCATTGACCAAGGTAGACAA CTGATTATACAGGCAAGGCAAGAACTGACAGATGAAGCCAACAAAAAACAAATTGTAGAATTAATAGAAACTATCCTGTT GTACAAATTCACCAACTTAAGCCGAGAGGAGGTAGCAGCTATGTTGGGTATAGATGACGAATTCAAAAAAACTCGAATGT ATCAGTCTATTAAGGAAGATGGACTAGAAGAAGGTAGACAAGAAGGTAGGCAACAGGGCATACAAGAAGGTAGACAAGAA GGTAGGTTACAAGCCAAGTTAGAGGCTATTCCCCGTTTGTTAGCGTTGGGGTTGAGTGTAGAACAGATAGCAAGTGCTTT AGATTTAAGTATTGAGCAAGTTCAGCAAGTAACAGGGAATTAG
Upstream 100 bases:
>100_bases GTGGAGTTGTGGAGGCGATCGCTCACTCTTTTTACTCAAAGTTTCTTGTTTTGATGTGGAATGATGGGGTTGTCAGAACA AAATTACGAATTATATCCAG
Downstream 100 bases:
>100_bases TTGATTTTTGCTGAGTACCCGATGATAGGTGTGTCACATTCCGATCACATTTGCTTGTAACCCTAGCGGTGTAGGCTTCC TATGGCTATTTACTGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQTDKIFYSLFQAFTSIFFAIIGEADINPSTYEFVSVELKETAFRIDGVFKPVNETTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRSILDSSQIQRIYLDELGTANENSLQLAIMQLIIASEAIAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQQGIQEGRQE GRLQAKLEAIPRLLALGLSVEQIASALDLSIEQVQQVTGN
Sequences:
>Translated_280_residues MQTDKIFYSLFQAFTSIFFAIIGEADINPSTYEFVSVELKETAFRIDGVFKPVNETTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRSILDSSQIQRIYLDELGTANENSLQLAIMQLIIASEAIAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQQGIQEGRQE GRLQAKLEAIPRLLALGLSVEQIASALDLSIEQVQQVTGN >Mature_280_residues MQTDKIFYSLFQAFTSIFFAIIGEADINPSTYEFVSVELKETAFRIDGVFKPVNETTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRSILDSSQIQRIYLDELGTANENSLQLAIMQLIIASEAIAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQQGIQEGRQE GRLQAKLEAIPRLLALGLSVEQIASALDLSIEQVQQVTGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32293; Mature: 32293
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDKIFYSLFQAFTSIFFAIIGEADINPSTYEFVSVELKETAFRIDGVFKPVNETTEEP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHCHHCCCCCCCCCC LYFVEVQFQLDPKFYRRFFAEIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRSILDS EEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHEEECHHHHCCCCCCCHHHHHHCH SQIQRIYLDELGTANENSLQLAIMQLIIASEAIAIDQGRQLIIQARQELTDEANKKQIVE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH LIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQQGIQEGRQE HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRLQAKLEAIPRLLALGLSVEQIASALDLSIEQVQQVTGN CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTDKIFYSLFQAFTSIFFAIIGEADINPSTYEFVSVELKETAFRIDGVFKPVNETTEEP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHCHHCCCCCCCCCC LYFVEVQFQLDPKFYRRFFAEIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRSILDS EEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHEEECHHHHCCCCCCCHHHHHHCH SQIQRIYLDELGTANENSLQLAIMQLIIASEAIAIDQGRQLIIQARQELTDEANKKQIVE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH LIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQQGIQEGRQE HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRLQAKLEAIPRLLALGLSVEQIASALDLSIEQVQQVTGN CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA