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The map label for this gene is psbO [H]

Identifier: 75908064

GI number: 75908064

Start: 2295446

End: 2296267

Strand: Direct

Name: psbO [H]

Synonym: Ava_1843

Alternate gene names: 75908064

Gene position: 2295446-2296267 (Clockwise)

Preceding gene: 75908062

Following gene: 75908065

Centisome position: 36.06

GC content: 43.55

Gene sequence:

>822_bases
ATGAGGTATCGCGCTTTAATTGTTGCATTCTTGGCTGTGTGCTTGGGGCTACTAACTGCTTGTAGTGACGCTCCAGCTTC
TAGTACCAGAGATATACTGACTTACGAACAAATTCGAGGCACTGGCCTGGCTAACAAATGTCCCCAACTTACAGAAACAA
GCCGTGGCTCAATTCCCTTGGATTCCAGCAAGTCCTACGTCATCAAAGAACTTTGCTTGGAACCAACCAATTTCTTTGTT
AAAGAAGAACCTGCTAATAAACGCCAAGCAGCAGAATTTGTAGCTGGCAAATTGTTAACCAGATACACTTCCACTATTGA
CCAGGTGTCAGGTGATCTTAAGTTCAACGATGATAGCAGCTTGACCTTTGTGGAAAAAGATGGTCTTGACTTCCAAGCCA
TTACGGTACAATTACCTGGTGGTGAGCGAGTACCCTTCCTGTTCACCATTAAAAATTTAGTTGCTCAAACACAACCTGGT
TTAAGCAGTCTAAATACTTCCACAGACTTTGAAGGTACATTCAAAGTACCTTCTTATCGTGGTGCTGCATTCTTAGATCC
TAAAGGTCGAGGTGTTGTTAGTGGCTATGATAATGCCGTAGCTCTTCCAGCCCAAGCCGATGATGAAGACCTTACCCGTA
CTAACGTTAAGCGTGCGGAAATTCTCAACGGCAAAATTTCTCTACAAATAGCTAAAGTTGATAGCTCTAGTGGTGAAATT
GCTGGTACTTTTGAGAGCGAACAGCCCTCGGATACTGATTTAGGCGCTGATGAACCCAAGGAAGTGAAGATTCGGGGTAT
ATTTTACGCTCGTGTTGAGTAA

Upstream 100 bases:

>100_bases
CGCGTTATTTGAGGTAAGTAGTGATGCCAATTTGCCGCAAAATGTACTTATCACTATGCCCAAACCATTTATATATCGAT
TTTTGACATTGAGGTTGATC

Downstream 100 bases:

>100_bases
ACCCAAACGTGCCTAAATTTTCTTGATTACCAAAGCTGTCTGCCACTGAAAACATTCTTGGCCTATGATCAAATTCCCTA
TTGAACGTTAACCCATACCC

Product: photosystem II manganese-stabilizing protein PsbO

Products: NA

Alternate protein names: MSP [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVIKELCLEPTNFFV
KEEPANKRQAAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE

Sequences:

>Translated_273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVIKELCLEPTNFFV
KEEPANKRQAAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
>Mature_273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVIKELCLEPTNFFV
KEEPANKRQAAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002628 [H]

Pfam domain/function: PF01716 MSP [H]

EC number: NA

Molecular weight: Translated: 29609; Mature: 29609

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DSSKSYVIKELCLEPTNFFVKEEPANKRQAAEFVAGKLLTRYTSTIDQVSGDLKFNDDSS
CCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
LTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYR
EEEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHCCCCHHHCCCCCCCCEEEECCCCC
GAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
CCEEECCCCCEEECCCCCEEEECCCCCCCHHHHHCCHHHHEECCEEEEEEEEECCCCCCE
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
EEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DSSKSYVIKELCLEPTNFFVKEEPANKRQAAEFVAGKLLTRYTSTIDQVSGDLKFNDDSS
CCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
LTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYR
EEEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHCCCCHHHCCCCCCCCEEEECCCCC
GAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
CCEEECCCCCEEECCCCCEEEECCCCCCCHHHHHCCHHHHEECCEEEEEEEEECCCCCCE
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
EEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2518833; 11759840 [H]