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The map label for this gene is cphB

Identifier: 75908034

GI number: 75908034

Start: 2257753

End: 2258616

Strand: Direct

Name: cphB

Synonym: Ava_1813

Alternate gene names: 75908034

Gene position: 2257753-2258616 (Clockwise)

Preceding gene: 75908027

Following gene: 75908035

Centisome position: 35.47

GC content: 49.42

Gene sequence:

>864_bases
ATGCCGCAATTACAAGCTAAATCGCTGGAAATGAGGACACCCCAAGCAACTAAGACCGCCGTTCTCGTAATCGGAGGCGC
AGAAGATAAAGTTCATGGACGTGAAATCCTGAGAACTTTTTTTGGACGAGCTGGTGCAAGCAAAGCCTATATTACAATTA
TTCCATCTGCCTCCCGCGAACCTGCAATTATTGGTGGACGGTATATTCGCATTTTTGAAGAAATGGGTGCTGAAAAGGTC
GAAATTTTAGACATCCGTGAACGAGAACAATGCGAATCTTCACAGGTAAGGGCATCCCTCGAAGCCTGTAGTGGTGTTTT
CTTAACCGGAGGAGACCAACTGCGCCTGTGTGGTGTATTGTCTGATACGCCAGTAATGGAAATAATCCGACAGCGAGTGA
GAGGCGGGCAACTAACTCTGGCAGGCACAAGTGCTGGGGCAGCAGTGATGGGGCATCACATGATTGCTGGCGGCGGTAGT
GGTGAAACACCTAATCGTTCCCTGGTGGATATGGCAACAGGTTTGGGATTAATTCCCGAAGTGATTGTTGATCAACATTT
CCACAACCGCAATCGGATGGGTCGCCTCATTAGTGCGGTCGCTGCTCACCCCGATAGACTAGGTATTGGCATTGATGAAG
ATACTTGTGCTGTATTTGAACGCGATGGTTGGCTCCAAGTCTTGGGTAAAGGCAGCGTCACCATTGTCGATCCCACCGAA
CTCACCCACACCAACGAACCCCACGTTGGCGCTAACGAACCTTTAACCGTGCATAACTTACGTCTGCATATCCTCAGTTA
TGGCGATCGCTTCCATCTGTACCAAAGGACTGTATTGCCTGCGGTACACCGGATCTCCAGCTGA

Upstream 100 bases:

>100_bases
ATCAGGCTCCTAAACCTTGTTAAATTCACACGCCATTCGCCACAAGTCGGGAAACCCGTCCACAGCGATGGCTCCTAAAG
TTGTTGACAGGAGAAACACA

Downstream 100 bases:

>100_bases
CGGAATAGAGTACCTGAGGTTAGACTGAATTGATCTTTAATTTATTTCCTGCTGTAGAAAAATCAGAGGAATACCATGTA
AAAAGATAAAAACTGTTTTT

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MPQLQAKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFGRAGASKAYITIIPSASREPAIIGGRYIRIFEEMGAEKV
EILDIREREQCESSQVRASLEACSGVFLTGGDQLRLCGVLSDTPVMEIIRQRVRGGQLTLAGTSAGAAVMGHHMIAGGGS
GETPNRSLVDMATGLGLIPEVIVDQHFHNRNRMGRLISAVAAHPDRLGIGIDEDTCAVFERDGWLQVLGKGSVTIVDPTE
LTHTNEPHVGANEPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS

Sequences:

>Translated_287_residues
MPQLQAKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFGRAGASKAYITIIPSASREPAIIGGRYIRIFEEMGAEKV
EILDIREREQCESSQVRASLEACSGVFLTGGDQLRLCGVLSDTPVMEIIRQRVRGGQLTLAGTSAGAAVMGHHMIAGGGS
GETPNRSLVDMATGLGLIPEVIVDQHFHNRNRMGRLISAVAAHPDRLGIGIDEDTCAVFERDGWLQVLGKGSVTIVDPTE
LTHTNEPHVGANEPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS
>Mature_286_residues
PQLQAKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFGRAGASKAYITIIPSASREPAIIGGRYIRIFEEMGAEKVE
ILDIREREQCESSQVRASLEACSGVFLTGGDQLRLCGVLSDTPVMEIIRQRVRGGQLTLAGTSAGAAVMGHHMIAGGGSG
ETPNRSLVDMATGLGLIPEVIVDQHFHNRNRMGRLISAVAAHPDRLGIGIDEDTCAVFERDGWLQVLGKGSVTIVDPTEL
THTNEPHVGANEPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPHB_ANAVT (O86108)

Other databases:

- EMBL:   AJ005201
- EMBL:   CP000117
- RefSeq:   YP_322330.1
- ProteinModelPortal:   O86108
- STRING:   O86108
- GeneID:   3681980
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_1813
- NMPDR:   fig|240292.3.peg.2893
- eggNOG:   COG4242
- HOGENOM:   HBG403839
- ProtClustDB:   CLSK2518382
- BioCyc:   AVAR240292:AVA_1813-MONOMER
- GO:   GO:0006508
- InterPro:   IPR005320
- InterPro:   IPR011811
- PIRSF:   PIRSF032067
- TIGRFAMs:   TIGR02069

Pfam domain/function: PF03575 Peptidase_S51

EC number: =3.4.15.6

Molecular weight: Translated: 31123; Mature: 30992

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: ACT_SITE 155-155 ACT_SITE 173-173 ACT_SITE 197-197

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLQAKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFGRAGASKAYITIIPSASRE
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PAIIGGRYIRIFEEMGAEKVEILDIREREQCESSQVRASLEACSGVFLTGGDQLRLCGVL
CEEECCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEC
SDTPVMEIIRQRVRGGQLTLAGTSAGAAVMGHHMIAGGGSGETPNRSLVDMATGLGLIPE
CCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEECCCCCCCCCCHHHHHHHCCCHHHH
VIVDQHFHNRNRMGRLISAVAAHPDRLGIGIDEDTCAVFERDGWLQVLGKGSVTIVDPTE
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCHH
LTHTNEPHVGANEPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQLQAKSLEMRTPQATKTAVLVIGGAEDKVHGREILRTFFGRAGASKAYITIIPSASRE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PAIIGGRYIRIFEEMGAEKVEILDIREREQCESSQVRASLEACSGVFLTGGDQLRLCGVL
CEEECCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEC
SDTPVMEIIRQRVRGGQLTLAGTSAGAAVMGHHMIAGGGSGETPNRSLVDMATGLGLIPE
CCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEECCCCCCCCCCHHHHHHHCCCHHHH
VIVDQHFHNRNRMGRLISAVAAHPDRLGIGIDEDTCAVFERDGWLQVLGKGSVTIVDPTE
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCHH
LTHTNEPHVGANEPLTVHNLRLHILSYGDRFHLYQRTVLPAVHRISS
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9652408