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The map label for this gene is 75908016

Identifier: 75908016

GI number: 75908016

Start: 2237851

End: 2239440

Strand: Direct

Name: 75908016

Synonym: Ava_1795

Alternate gene names: NA

Gene position: 2237851-2239440 (Clockwise)

Preceding gene: 75908015

Following gene: 75908019

Centisome position: 35.15

GC content: 44.91

Gene sequence:

>1590_bases
ATGCGAATTCTACTAGTTTATCCAGTATTTCCAAAAACTTTTTGGTCATACGAAAAAATTCTAGCCTTAGTTGATCGCAA
GGTGTTGTTACCACCCTTGGGTTTAGTAACAGTAGCAGCGATTCTGCCCCAGGAATGGGAATTTAAGCTGGTAGACCGCA
ATATCCGTCCAGTCACAGAGGAAGAATGGGCTTGGGCAGATATCGTTATTTTCTCAGCGATGATTGTCCAAAAACAAGAT
TTACTTGAGCAAATTCAAGAAGCAAAACAACGCGGTAAATTAGTCGCCGTAGGCGGCCCCTATCCCACCTCCACACCTTC
TGATGTGCAGAACGTCGGGGCAGATTTCCTCATTCTTGATGAAGGGGAAATCACCCTGCCCATGTTTGTGGAAGCAGTGC
AACGGGGAGAAACATCTGGGACTTTCCGCACCGCAGAAAAGCCAGATGTGACAAGCACACCCGTACCCCGTTTTGATTTA
CTAGAACTGGATGCCTATGACATGATGTCGGTGCAGTTCTCGCGCGGGTGTCCCTTTCAGTGCGAATTTTGTGACATCAT
TGTTCTCTACGGACGCAAACCACGCACCAAAACTCCAGCACAGTTGTTGGCAGAGTTAGATTACCTATATGAATTAGGCT
GGCGGCGTGGTGTGTTCATGGTAGATGACAACTTTATTGGTAACAAGCGTAATGTGAAATTGTTACTGAAAGAGTTGAAA
GTCTGGATGGCTGAACATCAATATCCCTTTAAATTTGATACAGAGGCTTCCGTTGACCTAGCGCAAGACCAAGAAATGCT
GGATTTAATGGTCGAGTCTGGCTTCTCTGCGGTCTTTTTGGGAATTGAGACACCAGATGAAGATAGCTTACAACTAACCA
AAAAATTCCAAAATACCCGCAGTTCCCTAACAGATGCAGTGCAAACCATCATTAAAGCTGGATTGCGCCCAATGGCTGGG
TTTATCATCGGTTTTGATGGTGAAAAAGCAGGTGCAGGCGATCGCATCGTCCGTTTTGCTGAACAAGCCGGTATTCCCTC
TACCACCTTCGCTATGTTGCAAGCCTTACCCAACACAGCATTATGGCATCGCCTGAAGAAGGAAGGACGACTACGGGAAA
ACAAAGAAAGTAACATCAACCAAACAACGTTGATGAACTTTATCCCCACCCGTCCCCTAGAAGATATTGCCAGGGAATAT
ATAGAAGCCTTTTGTACTCTATACGACCCAGTAAAATACTTAGACCGCACCTATCGTTGTTTCCTTATGTTGGGTGCGCC
CCGTTACAAAACACCATTCAAAATGCCAGAGTTGGTAGTCATTAAAGCCTTGTTAATCGTTATTTGGCGACAAGGTGTCA
AACGAGAAACCCGTTGGAAGTTCTGGCATCACTTGTTTAGCATCCTCAAGCATAACCCTGGAGTGGTTGAACATTATATT
TCCGCTTGCGCCCACAATGAGCATTTTCTAGAATATCGCCAAATTGTGCGCGACGAAATTGAAAAACAACTAGCTGAATA
TTTAGCCCAAGGTGCTGAGAAACCATACGTTGTCCCTGTAGAGACAAAAGCTGAAGCAGTAGTTAGTTAA

Upstream 100 bases:

>100_bases
AAGCATTAACGGTAAACTGAAGCCAATTTAGAAAATAAGTTAATAAGTAATTATTTTTGTTAGCGTGGGATTACAATCAC
AGCGTGAGGATTGATACAAG

Downstream 100 bases:

>100_bases
ATAGATAGAAAATAGTAAGCGATCGCTTTCTAATTATCACAGATTAGAAGGCGATCGCTTTCATCTTTAATTTGACCTAA
GACTAATCTTGCTTTTGCGT

Product: cobalamin B12-binding

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MRILLVYPVFPKTFWSYEKILALVDRKVLLPPLGLVTVAAILPQEWEFKLVDRNIRPVTEEEWAWADIVIFSAMIVQKQD
LLEQIQEAKQRGKLVAVGGPYPTSTPSDVQNVGADFLILDEGEITLPMFVEAVQRGETSGTFRTAEKPDVTSTPVPRFDL
LELDAYDMMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPAQLLAELDYLYELGWRRGVFMVDDNFIGNKRNVKLLLKELK
VWMAEHQYPFKFDTEASVDLAQDQEMLDLMVESGFSAVFLGIETPDEDSLQLTKKFQNTRSSLTDAVQTIIKAGLRPMAG
FIIGFDGEKAGAGDRIVRFAEQAGIPSTTFAMLQALPNTALWHRLKKEGRLRENKESNINQTTLMNFIPTRPLEDIAREY
IEAFCTLYDPVKYLDRTYRCFLMLGAPRYKTPFKMPELVVIKALLIVIWRQGVKRETRWKFWHHLFSILKHNPGVVEHYI
SACAHNEHFLEYRQIVRDEIEKQLAEYLAQGAEKPYVVPVETKAEAVVS

Sequences:

>Translated_529_residues
MRILLVYPVFPKTFWSYEKILALVDRKVLLPPLGLVTVAAILPQEWEFKLVDRNIRPVTEEEWAWADIVIFSAMIVQKQD
LLEQIQEAKQRGKLVAVGGPYPTSTPSDVQNVGADFLILDEGEITLPMFVEAVQRGETSGTFRTAEKPDVTSTPVPRFDL
LELDAYDMMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPAQLLAELDYLYELGWRRGVFMVDDNFIGNKRNVKLLLKELK
VWMAEHQYPFKFDTEASVDLAQDQEMLDLMVESGFSAVFLGIETPDEDSLQLTKKFQNTRSSLTDAVQTIIKAGLRPMAG
FIIGFDGEKAGAGDRIVRFAEQAGIPSTTFAMLQALPNTALWHRLKKEGRLRENKESNINQTTLMNFIPTRPLEDIAREY
IEAFCTLYDPVKYLDRTYRCFLMLGAPRYKTPFKMPELVVIKALLIVIWRQGVKRETRWKFWHHLFSILKHNPGVVEHYI
SACAHNEHFLEYRQIVRDEIEKQLAEYLAQGAEKPYVVPVETKAEAVVS
>Mature_529_residues
MRILLVYPVFPKTFWSYEKILALVDRKVLLPPLGLVTVAAILPQEWEFKLVDRNIRPVTEEEWAWADIVIFSAMIVQKQD
LLEQIQEAKQRGKLVAVGGPYPTSTPSDVQNVGADFLILDEGEITLPMFVEAVQRGETSGTFRTAEKPDVTSTPVPRFDL
LELDAYDMMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPAQLLAELDYLYELGWRRGVFMVDDNFIGNKRNVKLLLKELK
VWMAEHQYPFKFDTEASVDLAQDQEMLDLMVESGFSAVFLGIETPDEDSLQLTKKFQNTRSSLTDAVQTIIKAGLRPMAG
FIIGFDGEKAGAGDRIVRFAEQAGIPSTTFAMLQALPNTALWHRLKKEGRLRENKESNINQTTLMNFIPTRPLEDIAREY
IEAFCTLYDPVKYLDRTYRCFLMLGAPRYKTPFKMPELVVIKALLIVIWRQGVKRETRWKFWHHLFSILKHNPGVVEHYI
SACAHNEHFLEYRQIVRDEIEKQLAEYLAQGAEKPYVVPVETKAEAVVS

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60674; Mature: 60674

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVYPVFPKTFWSYEKILALVDRKVLLPPLGLVTVAAILPQEWEFKLVDRNIRPVTE
CEEEEEECCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
EEWAWADIVIFSAMIVQKQDLLEQIQEAKQRGKLVAVGGPYPTSTPSDVQNVGADFLILD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCEEEEC
EGEITLPMFVEAVQRGETSGTFRTAEKPDVTSTPVPRFDLLELDAYDMMSVQFSRGCPFQ
CCCEEHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEEECCCHHHHHEEECCCCCCE
CEFCDIIVLYGRKPRTKTPAQLLAELDYLYELGWRRGVFMVDDNFIGNKRNVKLLLKELK
ECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHH
VWMAEHQYPFKFDTEASVDLAQDQEMLDLMVESGFSAVFLGIETPDEDSLQLTKKFQNTR
HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
SSLTDAVQTIIKAGLRPMAGFIIGFDGEKAGAGDRIVRFAEQAGIPSTTFAMLQALPNTA
HHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHH
LWHRLKKEGRLRENKESNINQTTLMNFIPTRPLEDIAREYIEAFCTLYDPVKYLDRTYRC
HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
FLMLGAPRYKTPFKMPELVVIKALLIVIWRQGVKRETRWKFWHHLFSILKHNPGVVEHYI
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
SACAHNEHFLEYRQIVRDEIEKQLAEYLAQGAEKPYVVPVETKAEAVVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCC
>Mature Secondary Structure
MRILLVYPVFPKTFWSYEKILALVDRKVLLPPLGLVTVAAILPQEWEFKLVDRNIRPVTE
CEEEEEECCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
EEWAWADIVIFSAMIVQKQDLLEQIQEAKQRGKLVAVGGPYPTSTPSDVQNVGADFLILD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCEEEEC
EGEITLPMFVEAVQRGETSGTFRTAEKPDVTSTPVPRFDLLELDAYDMMSVQFSRGCPFQ
CCCEEHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEEECCCHHHHHEEECCCCCCE
CEFCDIIVLYGRKPRTKTPAQLLAELDYLYELGWRRGVFMVDDNFIGNKRNVKLLLKELK
ECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHH
VWMAEHQYPFKFDTEASVDLAQDQEMLDLMVESGFSAVFLGIETPDEDSLQLTKKFQNTR
HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
SSLTDAVQTIIKAGLRPMAGFIIGFDGEKAGAGDRIVRFAEQAGIPSTTFAMLQALPNTA
HHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHH
LWHRLKKEGRLRENKESNINQTTLMNFIPTRPLEDIAREYIEAFCTLYDPVKYLDRTYRC
HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
FLMLGAPRYKTPFKMPELVVIKALLIVIWRQGVKRETRWKFWHHLFSILKHNPGVVEHYI
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
SACAHNEHFLEYRQIVRDEIEKQLAEYLAQGAEKPYVVPVETKAEAVVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]