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The map label for this gene is 75676550

Identifier: 75676550

GI number: 75676550

Start: 2585483

End: 2587090

Strand: Direct

Name: 75676550

Synonym: Nwi_2365

Alternate gene names: NA

Gene position: 2585483-2587090 (Clockwise)

Preceding gene: 75676549

Following gene: 75676551

Centisome position: 76.0

GC content: 67.16

Gene sequence:

>1608_bases
ATGTCGGACACCGACGTCGTCATCATCGGCGCAGGCCACAATGGCTTGACCTGCGCGGCCTATCTCGCGATGGCCGGACT
GCGCGTCAGGGTCGTGGAACGGCGCAAGGTGGTGGGCGGCGCGGCCGTGACCGAGGAATTTCACCCCGGTTTCCGCAATT
CGGTCGCGGCCTACACCGTCAGCCTGCTCAATCCGAAAGTCATCGCCGACCTGCGGCTGCACGATCACGGCCTGCGGATC
GTCGAACGCCGCGCCCAGAACTTCCTGCCCGCTCCCGATGGCCGCTACCTGCTCACCGGCGAAGGTCGCACCAAGGCTTC
GGCGGCCCGCCTGAGCGAACGGGACGCCGCCGTACTCGACGAGTTCATGCGCGAACTCGAAGAGATCGCCGACGTCGTCC
GTCAGTTCGTGCTCCGCGCGCCGCCAAACCTCGGCGAGGGATTTGGCCTCAAGGCCGCGGGCGAACTCGTCAACGCCATC
GGCTCCGCCGGAATCCTGCGCGGTCTTTCGCTGGAGCAGCAGCGCAGCCTGCTCGATCTCTTTACCCGATCGGCAGGAGA
CATGCTCGACGACCGCTTCGAAACCGATCTCATCAAATCCCTGTTCGGCTTCGACGCCATTGTCGGCAACTATGCGAGTC
CCTACGCGGCCGGCTCGGCCTACGTGATGCTGCATCACGCCTTCGGCGAAGTGAACGGCAAGAAAGGCGTTTGGGGACAC
GCCATCGGCGGCATGGGCGCGATCACCCAGGCGATGGCGGCGGCGGCGCGCGCGCACGGCGTGGAAATCGAAACAGACGC
GAGCGTGCGCGAGGTCGTCGTCGAACGAAAGCGCGCGGCAGGCGCCGTGCTCGACGACGGACGCACGATCCGCGCGAGGT
ATGTGGCGGCAAACGTCAACCCGAAACTGCTTTATACGCGGCTGCTGCCCGCCGGATCGGTACCGCCCTCATTTCTCGCC
CGCATCAGGAACTGGCGCAACGGCTCCGGGACGTTCCGGATGAACGTCGCGCTCTCCGCCCTCCCCTCATTTTCCGCTTT
GCCGGGCGCGGGCGATCATCTCAGCGCCGGGATCATCATCGCGCCCGGTCTCGACTACATGGACCGCGCCTGGCACGACG
CGCGCACGTTTGGCTGGAGCCGCGAACCGGTGGTCGAGGTTCTGATCCCTTCGGTGATCGACGACACGCTCGCGCCGTCC
GGCCGCCATGTGGCGAGCCTGTTCTGCCAGCATGTCGCGCCGCGATTGCCCGACGGCACTTCCTGGGACGATCATCGCGA
CGAGGTCGCCGACCTCATGATCGCGACCGTCGACCGCTACGCGCCGGGCTTTGCCGCCAGCGTGATCGGCCGGCAGATCC
TGTCGCCGCTCGACCTTGAACGCGAATTCGGATTGCTGGGTGGCGACATCTTCCACGGCGCGCTGACGCTGAACCAGTTG
TTCTCAGCCCGACCGATGCTGGGCTACGCCGACTATCGGGGACCGCTGAAGGGGCTCTATCACTGCGGCTCCGGCGCGCA
TCCCGGCGGCGGCGTCACCGGCGCACCCGGCCACAACGCCGCGCGCGCCATCCTGCGGGATCACCGGACGCTGTTCGCGC
GCCGCTGA

Upstream 100 bases:

>100_bases
CTCGGACTTCGACGACTGACCGCTACTGATCGCCACATCACGTAGTTACCTCCCAACCCTGAAGGACGACAGTCGGACCG
TCTGAGGATCTGAAGCGGAT

Downstream 100 bases:

>100_bases
CGATCGGCAGCACATATGGACTGCGCTCCGGTCGCCACCTGAACACCAAACCCGCGCCCAGGCCAAGTCGGTGGATAAGC
TTGTCGAAGCCCTGTGGACA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSDTDVVIIGAGHNGLTCAAYLAMAGLRVRVVERRKVVGGAAVTEEFHPGFRNSVAAYTVSLLNPKVIADLRLHDHGLRI
VERRAQNFLPAPDGRYLLTGEGRTKASAARLSERDAAVLDEFMRELEEIADVVRQFVLRAPPNLGEGFGLKAAGELVNAI
GSAGILRGLSLEQQRSLLDLFTRSAGDMLDDRFETDLIKSLFGFDAIVGNYASPYAAGSAYVMLHHAFGEVNGKKGVWGH
AIGGMGAITQAMAAAARAHGVEIETDASVREVVVERKRAAGAVLDDGRTIRARYVAANVNPKLLYTRLLPAGSVPPSFLA
RIRNWRNGSGTFRMNVALSALPSFSALPGAGDHLSAGIIIAPGLDYMDRAWHDARTFGWSREPVVEVLIPSVIDDTLAPS
GRHVASLFCQHVAPRLPDGTSWDDHRDEVADLMIATVDRYAPGFAASVIGRQILSPLDLEREFGLLGGDIFHGALTLNQL
FSARPMLGYADYRGPLKGLYHCGSGAHPGGGVTGAPGHNAARAILRDHRTLFARR

Sequences:

>Translated_535_residues
MSDTDVVIIGAGHNGLTCAAYLAMAGLRVRVVERRKVVGGAAVTEEFHPGFRNSVAAYTVSLLNPKVIADLRLHDHGLRI
VERRAQNFLPAPDGRYLLTGEGRTKASAARLSERDAAVLDEFMRELEEIADVVRQFVLRAPPNLGEGFGLKAAGELVNAI
GSAGILRGLSLEQQRSLLDLFTRSAGDMLDDRFETDLIKSLFGFDAIVGNYASPYAAGSAYVMLHHAFGEVNGKKGVWGH
AIGGMGAITQAMAAAARAHGVEIETDASVREVVVERKRAAGAVLDDGRTIRARYVAANVNPKLLYTRLLPAGSVPPSFLA
RIRNWRNGSGTFRMNVALSALPSFSALPGAGDHLSAGIIIAPGLDYMDRAWHDARTFGWSREPVVEVLIPSVIDDTLAPS
GRHVASLFCQHVAPRLPDGTSWDDHRDEVADLMIATVDRYAPGFAASVIGRQILSPLDLEREFGLLGGDIFHGALTLNQL
FSARPMLGYADYRGPLKGLYHCGSGAHPGGGVTGAPGHNAARAILRDHRTLFARR
>Mature_534_residues
SDTDVVIIGAGHNGLTCAAYLAMAGLRVRVVERRKVVGGAAVTEEFHPGFRNSVAAYTVSLLNPKVIADLRLHDHGLRIV
ERRAQNFLPAPDGRYLLTGEGRTKASAARLSERDAAVLDEFMRELEEIADVVRQFVLRAPPNLGEGFGLKAAGELVNAIG
SAGILRGLSLEQQRSLLDLFTRSAGDMLDDRFETDLIKSLFGFDAIVGNYASPYAAGSAYVMLHHAFGEVNGKKGVWGHA
IGGMGAITQAMAAAARAHGVEIETDASVREVVVERKRAAGAVLDDGRTIRARYVAANVNPKLLYTRLLPAGSVPPSFLAR
IRNWRNGSGTFRMNVALSALPSFSALPGAGDHLSAGIIIAPGLDYMDRAWHDARTFGWSREPVVEVLIPSVIDDTLAPSG
RHVASLFCQHVAPRLPDGTSWDDHRDEVADLMIATVDRYAPGFAASVIGRQILSPLDLEREFGLLGGDIFHGALTLNQLF
SARPMLGYADYRGPLKGLYHCGSGAHPGGGVTGAPGHNAARAILRDHRTLFARR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=553, Percent_Identity=39.7830018083183, Blast_Score=379, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI17540238, Length=531, Percent_Identity=37.6647834274953, Blast_Score=353, Evalue=1e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57427; Mature: 57296

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDVVIIGAGHNGLTCAAYLAMAGLRVRVVERRKVVGGAAVTEEFHPGFRNSVAAYTV
CCCCCEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHHHCCHHHHHHHCCCCCCCHHHHHH
SLLNPKVIADLRLHDHGLRIVERRAQNFLPAPDGRYLLTGEGRTKASAARLSERDAAVLD
HHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
EFMRELEEIADVVRQFVLRAPPNLGEGFGLKAAGELVNAIGSAGILRGLSLEQQRSLLDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FTRSAGDMLDDRFETDLIKSLFGFDAIVGNYASPYAAGSAYVMLHHAFGEVNGKKGVWGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCHH
AIGGMGAITQAMAAAARAHGVEIETDASVREVVVERKRAAGAVLDDGRTIRARYVAANVN
HCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCEECCCCEEEEEEEEECCC
PKLLYTRLLPAGSVPPSFLARIRNWRNGSGTFRMNVALSALPSFSALPGAGDHLSAGIII
HHEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEE
APGLDYMDRAWHDARTFGWSREPVVEVLIPSVIDDTLAPSGRHVASLFCQHVAPRLPDGT
ECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
SWDDHRDEVADLMIATVDRYAPGFAASVIGRQILSPLDLEREFGLLGGDIFHGALTLNQL
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHCCCCHHHHHHHHHHHHH
FSARPMLGYADYRGPLKGLYHCGSGAHPGGGVTGAPGHNAARAILRDHRTLFARR
HCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDTDVVIIGAGHNGLTCAAYLAMAGLRVRVVERRKVVGGAAVTEEFHPGFRNSVAAYTV
CCCCEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHHHCCHHHHHHHCCCCCCCHHHHHH
SLLNPKVIADLRLHDHGLRIVERRAQNFLPAPDGRYLLTGEGRTKASAARLSERDAAVLD
HHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
EFMRELEEIADVVRQFVLRAPPNLGEGFGLKAAGELVNAIGSAGILRGLSLEQQRSLLDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FTRSAGDMLDDRFETDLIKSLFGFDAIVGNYASPYAAGSAYVMLHHAFGEVNGKKGVWGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCHH
AIGGMGAITQAMAAAARAHGVEIETDASVREVVVERKRAAGAVLDDGRTIRARYVAANVN
HCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCEECCCCEEEEEEEEECCC
PKLLYTRLLPAGSVPPSFLARIRNWRNGSGTFRMNVALSALPSFSALPGAGDHLSAGIII
HHEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCEEE
APGLDYMDRAWHDARTFGWSREPVVEVLIPSVIDDTLAPSGRHVASLFCQHVAPRLPDGT
ECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
SWDDHRDEVADLMIATVDRYAPGFAASVIGRQILSPLDLEREFGLLGGDIFHGALTLNQL
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHCCCCHHHHHHHHHHHHH
FSARPMLGYADYRGPLKGLYHCGSGAHPGGGVTGAPGHNAARAILRDHRTLFARR
HCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]