Click here to switch to the map view.

The map label for this gene is yadH [H]

Identifier: 75676547

GI number: 75676547

Start: 2583037

End: 2583798

Strand: Direct

Name: yadH [H]

Synonym: Nwi_2362

Alternate gene names: 75676547

Gene position: 2583037-2583798 (Clockwise)

Preceding gene: 75676546

Following gene: 75676549

Centisome position: 75.92

GC content: 56.3

Gene sequence:

>762_bases
ATGAATTTCGGAGCCGTGCAGGCGATTTACAAGTTCGAGATGGCGCGCACCTGGCGCACGCTGCTGCAAAGCATCGTGTC
GCCGGTGGTTTCGACCTCGCTCTATTTCGTGGTGTTCGGCGCGGCGATCGGATCGCGCATCACCGAGGTCGAGGGCGTCA
GTTACGGCACCTTCATCGTACCGGGGCTCATCATGCTATCCGTGCTGACGCAAAGCATCACCAATGCTTCGTTCGGCATC
TACTTCCCGAAGTTCATCGGCACCATCTACGAGATACTGTCGGCGCCGGTTTCCTATTTCGAGATCATTATGGGCTATGT
GGGAGCCGCCGCCACCAAATCGATCATTCTGGGCCTGATCATTCTGGCGACCGCCGGCCTGTTCGTTCCGCTGCACATCC
ATCACCCGATCTGGATGCTGACCTTTCTGGTCCTGACCTCCGTCACATTCAGCCTGTTCGGCTTCATCATCGGCATCTGG
GCCGACGGCTTCGAGAAGCTGCAAATGATTCCGATGCTGATCATCACGCCGTTGACGTTCCTCGGAGGCAGTTTTTATTC
GATCAACATGCTGCCGCCGGCATGGCAAACCGCCGCGCTGTTCAATCCCGTCGTCTATCTCATCAGCGGATTCAGGTGGA
GTTTTTACGAGATCGCCGACGTCAGCCTGTCGGTCAGTATCGGCATGACGGTCGGTTTCCTCGTCGTCTGCATGTTGGTC
GTATGGTGGATATTCCGAACCGGCTATCGGCTGAGAAATTAA

Upstream 100 bases:

>100_bases
CTGCTCGGCGATCTCCGCGCCGCCGGCATCAGGTTTTCCGATCTCGACACCACACAAAGCTCGCTGGAAGAGATCTTCGT
CAGCCTGGTCAGGACCTGAC

Downstream 100 bases:

>100_bases
AGCATGGCCCCGGCGAACTGATGACCGTTCGACGCAAGAAAATGCGACCAGACAATAATCTCCAAGCACGGTTTCGAAAA
GTGGGAACACCCACGCAAAA

Product: ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNFGAVQAIYKFEMARTWRTLLQSIVSPVVSTSLYFVVFGAAIGSRITEVEGVSYGTFIVPGLIMLSVLTQSITNASFGI
YFPKFIGTIYEILSAPVSYFEIIMGYVGAAATKSIILGLIILATAGLFVPLHIHHPIWMLTFLVLTSVTFSLFGFIIGIW
ADGFEKLQMIPMLIITPLTFLGGSFYSINMLPPAWQTAALFNPVVYLISGFRWSFYEIADVSLSVSIGMTVGFLVVCMLV
VWWIFRTGYRLRN

Sequences:

>Translated_253_residues
MNFGAVQAIYKFEMARTWRTLLQSIVSPVVSTSLYFVVFGAAIGSRITEVEGVSYGTFIVPGLIMLSVLTQSITNASFGI
YFPKFIGTIYEILSAPVSYFEIIMGYVGAAATKSIILGLIILATAGLFVPLHIHHPIWMLTFLVLTSVTFSLFGFIIGIW
ADGFEKLQMIPMLIITPLTFLGGSFYSINMLPPAWQTAALFNPVVYLISGFRWSFYEIADVSLSVSIGMTVGFLVVCMLV
VWWIFRTGYRLRN
>Mature_253_residues
MNFGAVQAIYKFEMARTWRTLLQSIVSPVVSTSLYFVVFGAAIGSRITEVEGVSYGTFIVPGLIMLSVLTQSITNASFGI
YFPKFIGTIYEILSAPVSYFEIIMGYVGAAATKSIILGLIILATAGLFVPLHIHHPIWMLTFLVLTSVTFSLFGFIIGIW
ADGFEKLQMIPMLIITPLTFLGGSFYSINMLPPAWQTAALFNPVVYLISGFRWSFYEIADVSLSVSIGMTVGFLVVCMLV
VWWIFRTGYRLRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=42.1686746987952, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28085; Mature: 28085

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]