| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75676511
Identifier: 75676511
GI number: 75676511
Start: 2544610
End: 2545140
Strand: Direct
Name: 75676511
Synonym: Nwi_2326
Alternate gene names: NA
Gene position: 2544610-2545140 (Clockwise)
Preceding gene: 75676510
Following gene: 75676512
Centisome position: 74.8
GC content: 59.89
Gene sequence:
>531_bases GTGACCGGCGCGCTTGCTTCGGATCTGAGGACCTATCTTGCGGAGAATCCCGGCGCGGTGATCGAGGACGTGGCGCGCGA CCGCCATGTGCCGCCACGCACGGTGATCGAGGCACTGCCGTCCGGCATGGTGAAGCTCTGTCAGGGTGGCGTGTTCACGG ACGCAATGCAGGATATCACGCAATGGGGAGAAGTTACTCTTATCGTTCATACCGCTGACGCCATCTTTGAATTCACCGGA CCAATTCCGAACGGCGAGATCGGCCGCGGTTATTTTAACCTGATGCAGCCGAAGGGCCTGCACGGCCATCTGCGGCATGA GAGATGCGCCGCTATTGCCTTCGTCGAACGCCCCTTCATGGGCAAGTCTTCGGCATTCGTCGCGTTCCTGAATGTCGACG GCGGCGTGATGTTCAAGGTATTCGTGGGACGGGACGAGACAAGAGCGTTGCGGCAGGATCAGCTCGAACGATTCCGCGCG CTTGCTGAACGTTTGGGCGCCGTGCCGGCAAGCGAGGAGATTTGTTCATAG
Upstream 100 bases:
>100_bases CATCCGAAGTTCGAAGGTTTCGAGATCATCCAGAGCGAGCGAAAATCCGACGCCGCCGCCTGAAGTCGTAATCGACCCAT CGCATCACTGGAGGATTAAC
Downstream 100 bases:
>100_bases GAAGCTCCGGAGTCTGGGACAAAGCCCGTTATGGCGTTTCCGAGCGAAGCGGGTTTTCGGCACGGCCCGCGGATTGGGAT ACCGGTTCGCGGGAATAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HuvX Protein; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTGALASDLRTYLAENPGAVIEDVARDRHVPPRTVIEALPSGMVKLCQGGVFTDAMQDITQWGEVTLIVHTADAIFEFTG PIPNGEIGRGYFNLMQPKGLHGHLRHERCAAIAFVERPFMGKSSAFVAFLNVDGGVMFKVFVGRDETRALRQDQLERFRA LAERLGAVPASEEICS
Sequences:
>Translated_176_residues MTGALASDLRTYLAENPGAVIEDVARDRHVPPRTVIEALPSGMVKLCQGGVFTDAMQDITQWGEVTLIVHTADAIFEFTG PIPNGEIGRGYFNLMQPKGLHGHLRHERCAAIAFVERPFMGKSSAFVAFLNVDGGVMFKVFVGRDETRALRQDQLERFRA LAERLGAVPASEEICS >Mature_175_residues TGALASDLRTYLAENPGAVIEDVARDRHVPPRTVIEALPSGMVKLCQGGVFTDAMQDITQWGEVTLIVHTADAIFEFTGP IPNGEIGRGYFNLMQPKGLHGHLRHERCAAIAFVERPFMGKSSAFVAFLNVDGGVMFKVFVGRDETRALRQDQLERFRAL AERLGAVPASEEICS
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19287; Mature: 19156
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGALASDLRTYLAENPGAVIEDVARDRHVPPRTVIEALPSGMVKLCQGGVFTDAMQDIT CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QWGEVTLIVHTADAIFEFTGPIPNGEIGRGYFNLMQPKGLHGHLRHERCAAIAFVERPFM CCCCEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC GKSSAFVAFLNVDGGVMFKVFVGRDETRALRQDQLERFRALAERLGAVPASEEICS CCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC >Mature Secondary Structure TGALASDLRTYLAENPGAVIEDVARDRHVPPRTVIEALPSGMVKLCQGGVFTDAMQDIT CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QWGEVTLIVHTADAIFEFTGPIPNGEIGRGYFNLMQPKGLHGHLRHERCAAIAFVERPFM CCCCEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC GKSSAFVAFLNVDGGVMFKVFVGRDETRALRQDQLERFRALAERLGAVPASEEICS CCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA