| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676496
Identifier: 75676496
GI number: 75676496
Start: 2529273
End: 2530037
Strand: Direct
Name: 75676496
Synonym: Nwi_2311
Alternate gene names: NA
Gene position: 2529273-2530037 (Clockwise)
Preceding gene: 75676492
Following gene: 75676497
Centisome position: 74.34
GC content: 65.1
Gene sequence:
>765_bases ATGCGGCAAGGCGCTGATCCCTATTGTGGTCCTGCACCGCTGCCCGAAGATTTGGCGTCGAGTTGGAACTTCGACCCGCT ACTCATTGCTGTGTTTGCAGGAGTCGCTGCTGCCTGCATGATGATGTCGCGCGAGCGCCGGATCGCGGCGCTGAAATCGC CGGCCGCGTTGGCTGGCTGGGCGGTGCTCCTGGCGGCGTTCGTTTCACCACTCTGCGCGCTTGCCTCCGCGCTTTTTTCC GCGCGGGTCTTTCATCACGTGCTTCTGGTCGCCCTGGCCGCCCCGTTGTTCGCCCTGGCCTTTCCGCCACGAGCCACCTT GCGGCGGGTGCCTGTCTCCGGGCTGGTTCTCATCCACGCGATCTGCATGTGGGTGTGGCACACGCCCGGGCCTTACGCGT TCGCGCTCGATTCCACCGCGGCGTACTGGATGATGGAGGCAAGTCTCTTTCTGTCGGCCTTTCTGCTCTGGCAGGCTGTG CTTGACAGGCGAAATCATGCCGGTGCCGCGCTGGCCGCGCTTCTGGCCACCGTCATCCAGATGGGGATGCTCGGCGCGCT GCTGACCTTCGCGGCCCGGCCCCTGTTCGATCATCACATGACGACCACCCTGCCCTACGGATTGACGCCTCTCGACGACC AGCAGCTCGCCGGCCTCCTGATGTGGATTCCGGCTTCGATGTCCTATCTCGCCGCCGCGGCGCTGCTGGCTGCGCGCATG CTGGAAACGCACCCGCATCCCACTCAAAGCACGCGCCCGACATGA
Upstream 100 bases:
>100_bases TCAAAGGAACGCGCGTCAGCGCACGACAGGCAGGCTTTGCAAGAACAAAACTGTTTCTGAGAAGTTGAGCAGGTCTGTTC AACGGATGTTGGGACATCAC
Downstream 100 bases:
>100_bases CGATCATCTGGTTGAAGTTCATCCATGTCGGCGCGATCAGCCTCTGGTGCGCGGGCTTGATCGGCCTCCCGGCGCTTTAC GGACAGCGCGTGCGCCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM LETHPHPTQSTRPT
Sequences:
>Translated_254_residues MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM LETHPHPTQSTRPT >Mature_254_residues MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM LETHPHPTQSTRPT
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27298; Mature: 27298
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGW CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVLLAAFVSPLCALASALFSARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH ICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAVLDRRNHAGAALAALLATVIQ HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETHPHPTQSTRPT HHCCCCCCCCCCCC >Mature Secondary Structure MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGW CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVLLAAFVSPLCALASALFSARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH ICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAVLDRRNHAGAALAALLATVIQ HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETHPHPTQSTRPT HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA