Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75676496

Identifier: 75676496

GI number: 75676496

Start: 2529273

End: 2530037

Strand: Direct

Name: 75676496

Synonym: Nwi_2311

Alternate gene names: NA

Gene position: 2529273-2530037 (Clockwise)

Preceding gene: 75676492

Following gene: 75676497

Centisome position: 74.34

GC content: 65.1

Gene sequence:

>765_bases
ATGCGGCAAGGCGCTGATCCCTATTGTGGTCCTGCACCGCTGCCCGAAGATTTGGCGTCGAGTTGGAACTTCGACCCGCT
ACTCATTGCTGTGTTTGCAGGAGTCGCTGCTGCCTGCATGATGATGTCGCGCGAGCGCCGGATCGCGGCGCTGAAATCGC
CGGCCGCGTTGGCTGGCTGGGCGGTGCTCCTGGCGGCGTTCGTTTCACCACTCTGCGCGCTTGCCTCCGCGCTTTTTTCC
GCGCGGGTCTTTCATCACGTGCTTCTGGTCGCCCTGGCCGCCCCGTTGTTCGCCCTGGCCTTTCCGCCACGAGCCACCTT
GCGGCGGGTGCCTGTCTCCGGGCTGGTTCTCATCCACGCGATCTGCATGTGGGTGTGGCACACGCCCGGGCCTTACGCGT
TCGCGCTCGATTCCACCGCGGCGTACTGGATGATGGAGGCAAGTCTCTTTCTGTCGGCCTTTCTGCTCTGGCAGGCTGTG
CTTGACAGGCGAAATCATGCCGGTGCCGCGCTGGCCGCGCTTCTGGCCACCGTCATCCAGATGGGGATGCTCGGCGCGCT
GCTGACCTTCGCGGCCCGGCCCCTGTTCGATCATCACATGACGACCACCCTGCCCTACGGATTGACGCCTCTCGACGACC
AGCAGCTCGCCGGCCTCCTGATGTGGATTCCGGCTTCGATGTCCTATCTCGCCGCCGCGGCGCTGCTGGCTGCGCGCATG
CTGGAAACGCACCCGCATCCCACTCAAAGCACGCGCCCGACATGA

Upstream 100 bases:

>100_bases
TCAAAGGAACGCGCGTCAGCGCACGACAGGCAGGCTTTGCAAGAACAAAACTGTTTCTGAGAAGTTGAGCAGGTCTGTTC
AACGGATGTTGGGACATCAC

Downstream 100 bases:

>100_bases
CGATCATCTGGTTGAAGTTCATCCATGTCGGCGCGATCAGCCTCTGGTGCGCGGGCTTGATCGGCCTCCCGGCGCTTTAC
GGACAGCGCGTGCGCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS
ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV
LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM
LETHPHPTQSTRPT

Sequences:

>Translated_254_residues
MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS
ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV
LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM
LETHPHPTQSTRPT
>Mature_254_residues
MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGWAVLLAAFVSPLCALASALFS
ARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHAICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAV
LDRRNHAGAALAALLATVIQMGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM
LETHPHPTQSTRPT

Specific function: Unknown

COG id: COG3336

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27298; Mature: 27298

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGW
CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AVLLAAFVSPLCALASALFSARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH
ICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAVLDRRNHAGAALAALLATVIQ
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETHPHPTQSTRPT
HHCCCCCCCCCCCC
>Mature Secondary Structure
MRQGADPYCGPAPLPEDLASSWNFDPLLIAVFAGVAAACMMMSRERRIAALKSPAALAGW
CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AVLLAAFVSPLCALASALFSARVFHHVLLVALAAPLFALAFPPRATLRRVPVSGLVLIHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH
ICMWVWHTPGPYAFALDSTAAYWMMEASLFLSAFLLWQAVLDRRNHAGAALAALLATVIQ
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MGMLGALLTFAARPLFDHHMTTTLPYGLTPLDDQQLAGLLMWIPASMSYLAAAALLAARM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETHPHPTQSTRPT
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA