| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676424
Identifier: 75676424
GI number: 75676424
Start: 2435185
End: 2435997
Strand: Direct
Name: 75676424
Synonym: Nwi_2239
Alternate gene names: NA
Gene position: 2435185-2435997 (Clockwise)
Preceding gene: 75676423
Following gene: 75676425
Centisome position: 71.58
GC content: 60.52
Gene sequence:
>813_bases ATGATCACCAGACTGAGTTCCATCGTGATTTCGCTTCAGAAATTTTCATGTCTCGCGGCAGCCCTGGTACTCGCAGGCAT CGCTCCCACCATCGCGGCCCAACCCAAGCCCGACGTCGCCGTCAAGACGAAATACATCGACGCCAGCGTCACGCTCGACA AGCAGATCAGGGCCAATGCGCCGCTGGCGGAGAACCTGCTCGCGGAAGGCAAGCATTGGGTCGAGAAGAACCGCGCGGAT GCGGCGAAGGAATTCAAGACATCGCCGGAATTATTCCGCGACGGTCGCGCTTGGACCTTCGAACGCAGTTACGCCCAAAC GTCGAATGTCGGTGACCGGTACGTCAGCATCGTGCGCACCGACTATGTCTATACCGGGCGCGCGCATCCCAATACGCTCA TTGATACGATCCTTTGGGACGAAGAGACGAGGAAGCAGATCAGCATCCGTCCGTTCTTTAAGGAAACCGCCGACACCGGC CCAACGCTGAAAACGCTGCGCAACGCCGCTATCGCCGCCGTAAAGGCCGAGAAGAAGGAACGCGGCATCGAGGATTCCGG CGACATCGACTGGTACCAGGGCATATTGCCAGCGCTGCTGAAGGTCGGAGCCATATCGCTGGCCCCTTCCACCGTGGCCG GCAAGAGCGCCGGCCTCGCGTTTCATTACTCGCCCTACGCAGTCGGTCCCTACGCCGAGGGTTCATATACCGTGTTCGTG CCGTGGGAGACCTTCAAGGCGCATCTGTCGCCGCAGGGCCTTGCGATCTTCGGCGGCGACCGCCCTCCCGATACGAAGCC TGACGCCGAATGA
Upstream 100 bases:
>100_bases TCTCTATGATCCGGACTCCAGGACGCGGATGGCCGGGACATAGGCGAGCGAAGCGACGCCGTTCTTCGAACGGCTATGCC CGGCCATGACGAGGGTTGCC
Downstream 100 bases:
>100_bases ACCGCCCGCTCGCTATCCCCGGCATCGCCGCCGATATCCGCGCCGGCAACCGCGCGGCGCTGGCGCGCGCCATCACCCTG ATCGAAAGCCGCCGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MITRLSSIVISLQKFSCLAAALVLAGIAPTIAAQPKPDVAVKTKYIDASVTLDKQIRANAPLAENLLAEGKHWVEKNRAD AAKEFKTSPELFRDGRAWTFERSYAQTSNVGDRYVSIVRTDYVYTGRAHPNTLIDTILWDEETRKQISIRPFFKETADTG PTLKTLRNAAIAAVKAEKKERGIEDSGDIDWYQGILPALLKVGAISLAPSTVAGKSAGLAFHYSPYAVGPYAEGSYTVFV PWETFKAHLSPQGLAIFGGDRPPDTKPDAE
Sequences:
>Translated_270_residues MITRLSSIVISLQKFSCLAAALVLAGIAPTIAAQPKPDVAVKTKYIDASVTLDKQIRANAPLAENLLAEGKHWVEKNRAD AAKEFKTSPELFRDGRAWTFERSYAQTSNVGDRYVSIVRTDYVYTGRAHPNTLIDTILWDEETRKQISIRPFFKETADTG PTLKTLRNAAIAAVKAEKKERGIEDSGDIDWYQGILPALLKVGAISLAPSTVAGKSAGLAFHYSPYAVGPYAEGSYTVFV PWETFKAHLSPQGLAIFGGDRPPDTKPDAE >Mature_270_residues MITRLSSIVISLQKFSCLAAALVLAGIAPTIAAQPKPDVAVKTKYIDASVTLDKQIRANAPLAENLLAEGKHWVEKNRAD AAKEFKTSPELFRDGRAWTFERSYAQTSNVGDRYVSIVRTDYVYTGRAHPNTLIDTILWDEETRKQISIRPFFKETADTG PTLKTLRNAAIAAVKAEKKERGIEDSGDIDWYQGILPALLKVGAISLAPSTVAGKSAGLAFHYSPYAVGPYAEGSYTVFV PWETFKAHLSPQGLAIFGGDRPPDTKPDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29499; Mature: 29499
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLSSIVISLQKFSCLAAALVLAGIAPTIAAQPKPDVAVKTKYIDASVTLDKQIRANA CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEEEEEEECHHHHCCC PLAENLLAEGKHWVEKNRADAAKEFKTSPELFRDGRAWTFERSYAQTSNVGDRYVSIVRT CHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHCCCCHHHHEEEEE DYVYTGRAHPNTLIDTILWDEETRKQISIRPFFKETADTGPTLKTLRNAAIAAVKAEKKE CEEEECCCCCHHHHHHHHCCCHHHHEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGIEDSGDIDWYQGILPALLKVGAISLAPSTVAGKSAGLAFHYSPYAVGPYAEGSYTVFV CCCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHCCCCCCEEEEECCEEECCCCCCCEEEEE PWETFKAHLSPQGLAIFGGDRPPDTKPDAE EHHHHHHHCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MITRLSSIVISLQKFSCLAAALVLAGIAPTIAAQPKPDVAVKTKYIDASVTLDKQIRANA CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEEEEEEECHHHHCCC PLAENLLAEGKHWVEKNRADAAKEFKTSPELFRDGRAWTFERSYAQTSNVGDRYVSIVRT CHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHCCCCHHHHEEEEE DYVYTGRAHPNTLIDTILWDEETRKQISIRPFFKETADTGPTLKTLRNAAIAAVKAEKKE CEEEECCCCCHHHHHHHHCCCHHHHEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGIEDSGDIDWYQGILPALLKVGAISLAPSTVAGKSAGLAFHYSPYAVGPYAEGSYTVFV CCCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHCCCCCCEEEEECCEEECCCCCCCEEEEE PWETFKAHLSPQGLAIFGGDRPPDTKPDAE EHHHHHHHCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA