| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676400
Identifier: 75676400
GI number: 75676400
Start: 2407938
End: 2408936
Strand: Direct
Name: 75676400
Synonym: Nwi_2215
Alternate gene names: NA
Gene position: 2407938-2408936 (Clockwise)
Preceding gene: 75676398
Following gene: 75676401
Centisome position: 70.78
GC content: 67.07
Gene sequence:
>999_bases ATGAAGAACCTCCTCACCGACATTTCCGGGGTCCGTGTCGGCCACGCCGACGACGCACGGCTGGCGTCAGGCGTGACGGC GGTGCTTTTCGACACCCCCGTGGTGGCGGCGATGGACGTGCGCGGCGGGGGGCCGGGCACCCGCGACAGCACCCTGCTCG ATCCGGTCAACACGGTGGAGCGGATCGACGCGCTCGCGCTGTCAGGCGGCTCCGCTTTCGGAGTCGAGTCCGGCGGCGGC GTTCAGGCCTGGCTCGCCGAACAGGGGCGCGGCTTCGTGATCGGCGACGCGACCGTCCCGATTGTGCCCGGCGCGGTGGT GTTCGACCTCTTGAACGGTGGCGACAAGAAGTGGGGTCGTTTTGCGCCTTATCGCGATCTTGGCTACGCCGCCGCAGCGG CGGCGGGAGAAGATTTCGCGCTCGGCAGCACCGGCGCCGGACTCGGCGCGACGACCGCCAATCTGAAAGGCGGCATCGGC TCCGCTTCGGCGGCCACGCCCGGCGGCGTGAAAGTGGCGGCGCTCGCCGTGGTGAACGCCGTCGGCAGCGTCACAGTCGG AGATGGCCCCTGGTTCTGGGCGGTGCCATTTGAAACCGGCGACGAATATGGCGGACGCGGGCTGCCGCCGTCGTTCACGC CGGATATGCTGGCGATGCGATTGAAGGACGGCGCGACAGCGAAGGCCGGCGAGAATACCACGCTCGCCATCGTCGTCACC GATGCCGTGCTCACCAAGCCGCAGGCCAGGCGGCTCGCGATAATGTCACAAACCGGTTTCGCACGGGCGATTTATCCGGT TCACGCGCCGCTGGACGGCGATATCGTGTTCGCTGCCGCTACCGGAGACAAGCCCATCGATCCGTTCGTCGAATTGACCG AACTCGGAATGATTGCGGCCAACACGGTGGCTCGCGCGATCGCGCGTGGCGTCTATGAAGCAAAAGCACTTCCGTTTCCG GATGCATTGCCGGCATGGAAGGACCGGTTTGCGCGCTGA
Upstream 100 bases:
>100_bases CCGCGACATTTGTGATCAGACGTGATCGATTGACCCGGCCTCGCGACTGCCGTCATCTGACAGCAACCCTTTTCCATCCG CCCGCGAACGAGACTGAACC
Downstream 100 bases:
>100_bases CCGCAATCGAGGCGCATAGGTTTTTCTCCTGAGCAAAGCGGTATGTATTTAAAGTATAGTTGGTGTATTTACGTGGATTA ATCGACGTATTTAAGGTTAG
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP DALPAWKDRFAR
Sequences:
>Translated_332_residues MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP DALPAWKDRFAR >Mature_332_residues MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP DALPAWKDRFAR
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 33763; Mature: 33763
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVE CCCHHHHHCCEEECCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH RIDALALSGGSAFGVESGGGVQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGR HHHHHEECCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCC FAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIGSASAATPGGVKVAALAVVNA CCCCHHCCHHHHHCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHH VGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT HCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEE DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAA CHHHCCCCHHEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH NTVARAIARGVYEAKALPFPDALPAWKDRFAR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVE CCCHHHHHCCEEECCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH RIDALALSGGSAFGVESGGGVQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGR HHHHHEECCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCC FAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIGSASAATPGGVKVAALAVVNA CCCCHHCCHHHHHCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHH VGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT HCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEE DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAA CHHHCCCCHHEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH NTVARAIARGVYEAKALPFPDALPAWKDRFAR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]