| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is xlnD [H]
Identifier: 75676367
GI number: 75676367
Start: 2377745
End: 2378983
Strand: Direct
Name: xlnD [H]
Synonym: Nwi_2182
Alternate gene names: 75676367
Gene position: 2377745-2378983 (Clockwise)
Preceding gene: 75676366
Following gene: 75676371
Centisome position: 69.89
GC content: 69.09
Gene sequence:
>1239_bases ATGCGTGGTGAGGGACAAGGCCGCCTGATCCACCCTGTGCGCACGTTACGCACAGTCGTCATCGCCGGCGCCGGAATCGG AGGCTTGACGGCGGCGCTGGCGCTGGCGGCGAGAGGGTTTCGCGTCCTCGTCATCGAAACGGCCGAACGCCTCGAAGAGG CCGGCGCGGGGCTGCAGCTTTCGCCAAATGCAACGCGTATCCTGATTGGGCTCGGCCTGCATGAGCGGCTGTCCGCCCGC GCGCTAATTCCGGAAGCCGTCAGCATCATGAGCGTAAGGCACGGCGGCGAGATCTGCCGCCTCCCGCTTGGCGAGGCAGC CGCCTCGCGCGCTGGTGCGCCCTACTGGGTGATGCATCGCGCCGACCTGCAGGCGGCCCTGCTGGAGCAGGTTCACGATC ATCCCGGCATCGAGCTGCGTCTCGGCGCTAACGCCGAAGACGCGGCCGCATATGCCACCGGCGCGAATGCCGAGGTGTGC GGCGGCACGACACACCCGCAGGAGACCGCATGGGCGCTGATCGGCGCTGACGGGGTATGGTCCGCCTTGCGCAGGCGGCT TTTTCCGAACGCTGCGGCGCTGTTTTCCGGCCTGATCGCATGGCGTGGGACCGTCGAGACCGCTCAACTCCCGCATGACA TGGCCGCGCCGCGCATCCAGCTCTGGATGGGTCCGGACGCGCATCTCGTGACCTATCCGATGTCGGGAGGGCGCCGGATC AACCTGGTCGCGGTCGTCCCTGGCGGCTGGACTGAGCCCGGCTGGAGCGCGGTCGGAGATGCCGCGGAGATCCAGCGCGC TTTCGCGCAGGCGTCCTGGCCCCAGCCCGCGCGCTTGATGATCGACGCGGTGGACCACTGGCGCAAATGGGCGCTGTTCA CGATGCCGCCGATGGCCGCGTGGCACCGCGACACCACAGCCCTGCTCGGCGATGCCGCCCATGCGATGCTGCCGTTCGCC GCGCAGGGGGCGGGCATGGCGATCGAGGATGCCGCGGTTCTGGCGCGGTGTCTCGGCGAAGCCGCGAACGGGAACTCCGA AAGCGTCGCGTCCGCGCTCGCGCGTTACGCCGGGCTGCGCCGCGCACGCGTTGCGCGGATGCAAGACACCGCGCAACTAA ATGGACGAATCTACCATCTTCGGGGCGTCGCCGCCTCGGCGCGCGATCTCGCCATCAGGGCGATGGGTCCGCAGCGTATG CTGGCGCGTCAGGACTGGATCTACAATTGGCGGCCCTGA
Upstream 100 bases:
>100_bases TTCTCGATCTCGGCGACGACGGCGAAATCATCTGCCCCTACTGCTCGACGCTGTATCGTTTCGCGGCCGACCTAGGTCCC GGACAGTCCCGTCCTCCCGG
Downstream 100 bases:
>100_bases ACCGGGATGGTCCAGGCCCGTCCTTCATCAGGAAGAGCACCTGACGAAGATTACTTGCGAGCGTCGCCTGCGGGCGTCTC CTGCGCCGCGGAAGCCTCGT
Product: monooxygenase, FAD-binding
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRGEGQGRLIHPVRTLRTVVIAGAGIGGLTAALALAARGFRVLVIETAERLEEAGAGLQLSPNATRILIGLGLHERLSAR ALIPEAVSIMSVRHGGEICRLPLGEAAASRAGAPYWVMHRADLQAALLEQVHDHPGIELRLGANAEDAAAYATGANAEVC GGTTHPQETAWALIGADGVWSALRRRLFPNAAALFSGLIAWRGTVETAQLPHDMAAPRIQLWMGPDAHLVTYPMSGGRRI NLVAVVPGGWTEPGWSAVGDAAEIQRAFAQASWPQPARLMIDAVDHWRKWALFTMPPMAAWHRDTTALLGDAAHAMLPFA AQGAGMAIEDAAVLARCLGEAANGNSESVASALARYAGLRRARVARMQDTAQLNGRIYHLRGVAASARDLAIRAMGPQRM LARQDWIYNWRP
Sequences:
>Translated_412_residues MRGEGQGRLIHPVRTLRTVVIAGAGIGGLTAALALAARGFRVLVIETAERLEEAGAGLQLSPNATRILIGLGLHERLSAR ALIPEAVSIMSVRHGGEICRLPLGEAAASRAGAPYWVMHRADLQAALLEQVHDHPGIELRLGANAEDAAAYATGANAEVC GGTTHPQETAWALIGADGVWSALRRRLFPNAAALFSGLIAWRGTVETAQLPHDMAAPRIQLWMGPDAHLVTYPMSGGRRI NLVAVVPGGWTEPGWSAVGDAAEIQRAFAQASWPQPARLMIDAVDHWRKWALFTMPPMAAWHRDTTALLGDAAHAMLPFA AQGAGMAIEDAAVLARCLGEAANGNSESVASALARYAGLRRARVARMQDTAQLNGRIYHLRGVAASARDLAIRAMGPQRM LARQDWIYNWRP >Mature_412_residues MRGEGQGRLIHPVRTLRTVVIAGAGIGGLTAALALAARGFRVLVIETAERLEEAGAGLQLSPNATRILIGLGLHERLSAR ALIPEAVSIMSVRHGGEICRLPLGEAAASRAGAPYWVMHRADLQAALLEQVHDHPGIELRLGANAEDAAAYATGANAEVC GGTTHPQETAWALIGADGVWSALRRRLFPNAAALFSGLIAWRGTVETAQLPHDMAAPRIQLWMGPDAHLVTYPMSGGRRI NLVAVVPGGWTEPGWSAVGDAAEIQRAFAQASWPQPARLMIDAVDHWRKWALFTMPPMAAWHRDTTALLGDAAHAMLPFA AQGAGMAIEDAAVLARCLGEAANGNSESVASALARYAGLRRARVARMQDTAQLNGRIYHLRGVAASARDLAIRAMGPQRM LARQDWIYNWRP
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 44020; Mature: 44020
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGEGQGRLIHPVRTLRTVVIAGAGIGGLTAALALAARGFRVLVIETAERLEEAGAGLQL CCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCEEE SPNATRILIGLGLHERLSARALIPEAVSIMSVRHGGEICRLPLGEAAASRAGAPYWVMHR CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEH ADLQAALLEQVHDHPGIELRLGANAEDAAAYATGANAEVCGGTTHPQETAWALIGADGVW HHHHHHHHHHHHCCCCEEEEECCCCCHHHHEECCCCCEECCCCCCCCCCEEEEEECHHHH SALRRRLFPNAAALFSGLIAWRGTVETAQLPHDMAAPRIQLWMGPDAHLVTYPMSGGRRI HHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCEE NLVAVVPGGWTEPGWSAVGDAAEIQRAFAQASWPQPARLMIDAVDHWRKWALFTMPPMAA EEEEECCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCHHH WHRDTTALLGDAAHAMLPFAAQGAGMAIEDAAVLARCLGEAANGNSESVASALARYAGLR HCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RARVARMQDTAQLNGRIYHLRGVAASARDLAIRAMGPQRMLARQDWIYNWRP HHHHHHHHHHHHHCCEEEEEECCCCCCHHEEEEECCHHHHHHHHCCCCCCCC >Mature Secondary Structure MRGEGQGRLIHPVRTLRTVVIAGAGIGGLTAALALAARGFRVLVIETAERLEEAGAGLQL CCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCEEE SPNATRILIGLGLHERLSARALIPEAVSIMSVRHGGEICRLPLGEAAASRAGAPYWVMHR CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEH ADLQAALLEQVHDHPGIELRLGANAEDAAAYATGANAEVCGGTTHPQETAWALIGADGVW HHHHHHHHHHHHCCCCEEEEECCCCCHHHHEECCCCCEECCCCCCCCCCEEEEEECHHHH SALRRRLFPNAAALFSGLIAWRGTVETAQLPHDMAAPRIQLWMGPDAHLVTYPMSGGRRI HHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCEE NLVAVVPGGWTEPGWSAVGDAAEIQRAFAQASWPQPARLMIDAVDHWRKWALFTMPPMAA EEEEECCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCHHH WHRDTTALLGDAAHAMLPFAAQGAGMAIEDAAVLARCLGEAANGNSESVASALARYAGLR HCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RARVARMQDTAQLNGRIYHLRGVAASARDLAIRAMGPQRMLARQDWIYNWRP HHHHHHHHHHHHHCCEEEEEECCCCCCHHEEEEECCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]