| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676326
Identifier: 75676326
GI number: 75676326
Start: 2337465
End: 2337761
Strand: Direct
Name: 75676326
Synonym: Nwi_2141
Alternate gene names: NA
Gene position: 2337465-2337761 (Clockwise)
Preceding gene: 75676320
Following gene: 75676333
Centisome position: 68.71
GC content: 64.98
Gene sequence:
>297_bases ATGACTAATCGCAATGGCGCCCCAATCAAACGAACCATACGCCGGCACCAGCTGCGTGAAATGGTGCCCCTTGCCGACAG CACGATCTACGAAATGGAACAGCGCGGTGAGTTTCCACGGCGTTTCGCGTTGTCTCCTAGATGCGTCGTGTGGGACCTGG CCGAAGTCGAGGCCTGGCTCGCCGCGCGGCGAGCGTCACCGGTGCGACGCGCCCAGCATCCCGATGTCCGCCAGCGACGC GCCCGCCCGGTCAGAGAGCGGGATCAGGCGCGAGGAGAGGCATCGAAGGCGGGATGA
Upstream 100 bases:
>100_bases ATACGCTATGCTATCCGACTGCCCGAACGCCGAATTGCAGTCCTTCCCATTCAGAGTTTATCGCGCTCATTTCCTTGGAG GAAAAGTCGAGGAGATGATG
Downstream 100 bases:
>100_bases GCACCGGCACGTATTTCTCGCCTGCCACCCACGCATCGACGATATTCGACCACTCTTGCAGCATGTGCCGGCGCTGCACC TCGTACTCGGCCTTGTTGTA
Product: prophage CP4-57 regulatory
Products: NA
Alternate protein names: Phage Transcriptional Regulator; Prophage CP4-57 Regulatory; Phage Transcriptional Regulator Alpa; AlpA Family Transcriptional Regulator; Prophage Regulatory Protein; Transcriptional Regulator AlpA Family; Regulatory Protein Alpa Family; Prophage Cp4-57 Regulatory
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTNRNGAPIKRTIRRHQLREMVPLADSTIYEMEQRGEFPRRFALSPRCVVWDLAEVEAWLAARRASPVRRAQHPDVRQRR ARPVRERDQARGEASKAG
Sequences:
>Translated_98_residues MTNRNGAPIKRTIRRHQLREMVPLADSTIYEMEQRGEFPRRFALSPRCVVWDLAEVEAWLAARRASPVRRAQHPDVRQRR ARPVRERDQARGEASKAG >Mature_97_residues TNRNGAPIKRTIRRHQLREMVPLADSTIYEMEQRGEFPRRFALSPRCVVWDLAEVEAWLAARRASPVRRAQHPDVRQRRA RPVRERDQARGEASKAG
Specific function: Unknown
COG id: COG3311
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11444; Mature: 11313
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRNGAPIKRTIRRHQLREMVPLADSTIYEMEQRGEFPRRFALSPRCVVWDLAEVEAWL CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH AARRASPVRRAQHPDVRQRRARPVRERDQARGEASKAG HHHHCCHHHHCCCCCHHHHHCCCHHHHHHHCCCCCCCC >Mature Secondary Structure TNRNGAPIKRTIRRHQLREMVPLADSTIYEMEQRGEFPRRFALSPRCVVWDLAEVEAWL CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH AARRASPVRRAQHPDVRQRRARPVRERDQARGEASKAG HHHHCCHHHHCCCCCHHHHHCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA