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The map label for this gene is 75676157

Identifier: 75676157

GI number: 75676157

Start: 2156085

End: 2156246

Strand: Direct

Name: 75676157

Synonym: Nwi_1966

Alternate gene names: NA

Gene position: 2156085-2156246 (Clockwise)

Preceding gene: 75676154

Following gene: 75676158

Centisome position: 63.38

GC content: 61.73

Gene sequence:

>162_bases
TTGCCGCCGCGTTGCCGCGAAGTGCTCATCCTCCATAAGTTCGAGAGCCTGAGCTACGCGCAGATTGCAGACCGTCTGGG
CATCGCAAAGAACTCGGTCGCCGCCCACATGGTGAAGGCGATATCCCACCTCCGGTCCCGATTCCGCGAGGCTTCCGCAT
AG

Upstream 100 bases:

>100_bases
CGTCGAACTTGACGAATCTATCGTCGATCCAGCGCCGCTGGCCGATGCGGCGCTGATCTCGCGGCAGGAGTTTCAGGCGC
TTCACGCCGCGCTCGCGGAT

Downstream 100 bases:

>100_bases
AAGCACCTAGAGCGGGATGGGTTTATTTTGAATCGATTGAGATTCCCAAATCAGAATTCATCTGATTCAACATGCTGACT
GGGAAGGAGGCCAGCATGGA

Product: RNA polymerase ECF-type sigma factor, FecI

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily

Number of amino acids: Translated: 53; Mature: 52

Protein sequence:

>53_residues
MPPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA

Sequences:

>Translated_53_residues
MPPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA
>Mature_52_residues
PPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5977; Mature: 5846

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA
CCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA