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The map label for this gene is yfgC [C]

Identifier: 75675941

GI number: 75675941

Start: 1918562

End: 1919995

Strand: Direct

Name: yfgC [C]

Synonym: Nwi_1749

Alternate gene names: 75675941

Gene position: 1918562-1919995 (Clockwise)

Preceding gene: 75675938

Following gene: 75675942

Centisome position: 56.39

GC content: 63.67

Gene sequence:

>1434_bases
ATGATTCCGAAGGCATTGACTAACGAAGATATGACCCGGCGGCCCGTCACTCCCCTACGTCGTTCTGTCTCGAAGCTGAT
GACGCTGGTCACCGCCTGCGCGATCGCGAACGCCTCCTTTCCAGCCCAAGCGCAACAGGACAAAGGTCTGCCGATGTTGC
GCGATAGCGAGACCGAGCAACTGCTGCGAGACTATACGCGGCCGATCCTGCGCGCGGCGGGGCTGCAAAAGCACAACATT
CAGATGGTCATCATCAACGACAGGTCCTTCAACGCCTTCGTCGCCGATGGCCGCCGCATCTTCGTGAACTACGGGGCGAT
TTCAAAGTCGACGACGCCGAACCAGTTGATCGGCGTGCTCGCGCATGAGACCGGGCATCTCGCCGGTGGCCATCTGTCCA
AGTTTCGCGAGCAGCTCGCCCGAACCCAGACCCAGCTCATCATCGCCATGCTTCTCGGCGCCGGCGCTCTCGCGGCCGGA
GCCGGCCGCGGCGGAAGCAACAGCCCCGGCAGCAATATCGGCGCGGCCGCGCTCAGCGCGCCTCAGGAAATCGCCCGCCG
AAGCCTGTTGGGCTATCAGCGCCAGCAGGAGGAAAACGCCGACCGCGCCGCCGTCAAGTTCCTCAACGCCACCGGCCAAT
CCCCCCGGGGCATGTACGAGACCTTCAAGCGCTTCACCGACGAAAGCCTGTTCGCCGCGCGCGGCGCCGATCCCTATGCG
CAGTCGCACCCGATGCCGGCCGACCGTGTCGCCGCGCTCGCGGAACTCGTCAAGACCAGCCCCAACTGGCAAAAGAAGGA
CGATCCGGCCCTGCAGATGCGCCATGACATGGTGCGTGCCAAGATCTCGGCGTTCATGGAACGTGAGGATACGGTATACC
GGCGCTATCCGCGGTCAGACACCAGCCTGCCCGCCCGCTACGCGCATGCCATCACCACCTACCTGCATGGCGATCTTCGC
TCGGCCATCGAGCAAATCGATGCGCTAATCAAGCTTCAGCCGCAGAACCCTTACTTCTACGAAGTACGTGGGCAGGCTTT
GCTCGAGGGAGGCCGCCCCACGGAGGCGATCGCACCGCTGCGGCGCGCCGTCCAGCTCTCGCGAAACGCTCCGCTCATCG
AGATGCTGCTGGGTCAGGCGCTCGTGGCCTCGAACAACAAGGCCAATGCCGACGAGGCTATCGCAATCCTGCGAACGGCG
CTGGTACGGGAGCCAGAGGCTCCGCTCGGCTATTCGCAGCTTGCGATAGCCTACGGCCGCAAGGGCGATTATGCACAAGC
CGATCTGGCATCGGCTCAGGCCGCGTTCCTGCGAGGCGACAACAAGACGGCGCGCGAACTCGCATCACGCGCGAAAACCC
GCTTCGCGATCGGCACGCCCGGATGGGTCAAGGCGGACGATATCGTCTCATCCAAGATTCCGGACAAGAAATAA

Upstream 100 bases:

>100_bases
CGGCCATGGAAATCTGTTAATGCGCTCTCTCGCCCGAGGCCGCGTTACCGCCTTATTCGGTGGGTTGTTTAGGACATACA
GCGTATTCGAACCCGCGCCA

Downstream 100 bases:

>100_bases
ACCAGACGGCTCCGCCACGCGGTCCCTTTCAAAGGATTGACAATGTCCTCTCTCCGATTTCTCGCTCCCGCCCTTCTTGC
GCTCGCGTTCAGCGCTCCTT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MIPKALTNEDMTRRPVTPLRRSVSKLMTLVTACAIANASFPAQAQQDKGLPMLRDSETEQLLRDYTRPILRAAGLQKHNI
QMVIINDRSFNAFVADGRRIFVNYGAISKSTTPNQLIGVLAHETGHLAGGHLSKFREQLARTQTQLIIAMLLGAGALAAG
AGRGGSNSPGSNIGAAALSAPQEIARRSLLGYQRQQEENADRAAVKFLNATGQSPRGMYETFKRFTDESLFAARGADPYA
QSHPMPADRVAALAELVKTSPNWQKKDDPALQMRHDMVRAKISAFMEREDTVYRRYPRSDTSLPARYAHAITTYLHGDLR
SAIEQIDALIKLQPQNPYFYEVRGQALLEGGRPTEAIAPLRRAVQLSRNAPLIEMLLGQALVASNNKANADEAIAILRTA
LVREPEAPLGYSQLAIAYGRKGDYAQADLASAQAAFLRGDNKTARELASRAKTRFAIGTPGWVKADDIVSSKIPDKK

Sequences:

>Translated_477_residues
MIPKALTNEDMTRRPVTPLRRSVSKLMTLVTACAIANASFPAQAQQDKGLPMLRDSETEQLLRDYTRPILRAAGLQKHNI
QMVIINDRSFNAFVADGRRIFVNYGAISKSTTPNQLIGVLAHETGHLAGGHLSKFREQLARTQTQLIIAMLLGAGALAAG
AGRGGSNSPGSNIGAAALSAPQEIARRSLLGYQRQQEENADRAAVKFLNATGQSPRGMYETFKRFTDESLFAARGADPYA
QSHPMPADRVAALAELVKTSPNWQKKDDPALQMRHDMVRAKISAFMEREDTVYRRYPRSDTSLPARYAHAITTYLHGDLR
SAIEQIDALIKLQPQNPYFYEVRGQALLEGGRPTEAIAPLRRAVQLSRNAPLIEMLLGQALVASNNKANADEAIAILRTA
LVREPEAPLGYSQLAIAYGRKGDYAQADLASAQAAFLRGDNKTARELASRAKTRFAIGTPGWVKADDIVSSKIPDKK
>Mature_477_residues
MIPKALTNEDMTRRPVTPLRRSVSKLMTLVTACAIANASFPAQAQQDKGLPMLRDSETEQLLRDYTRPILRAAGLQKHNI
QMVIINDRSFNAFVADGRRIFVNYGAISKSTTPNQLIGVLAHETGHLAGGHLSKFREQLARTQTQLIIAMLLGAGALAAG
AGRGGSNSPGSNIGAAALSAPQEIARRSLLGYQRQQEENADRAAVKFLNATGQSPRGMYETFKRFTDESLFAARGADPYA
QSHPMPADRVAALAELVKTSPNWQKKDDPALQMRHDMVRAKISAFMEREDTVYRRYPRSDTSLPARYAHAITTYLHGDLR
SAIEQIDALIKLQPQNPYFYEVRGQALLEGGRPTEAIAPLRRAVQLSRNAPLIEMLLGQALVASNNKANADEAIAILRTA
LVREPEAPLGYSQLAIAYGRKGDYAQADLASAQAAFLRGDNKTARELASRAKTRFAIGTPGWVKADDIVSSKIPDKK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=340, Percent_Identity=22.6470588235294, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 52153; Mature: 52153

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKALTNEDMTRRPVTPLRRSVSKLMTLVTACAIANASFPAQAQQDKGLPMLRDSETEQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHH
LLRDYTRPILRAAGLQKHNIQMVIINDRSFNAFVADGRRIFVNYGAISKSTTPNQLIGVL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEEEECCCCCCCCHHHHHHHH
AHETGHLAGGHLSKFREQLARTQTQLIIAMLLGAGALAAGAGRGGSNSPGSNIGAAALSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCC
PQEIARRSLLGYQRQQEENADRAAVKFLNATGQSPRGMYETFKRFTDESLFAARGADPYA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCCCCH
QSHPMPADRVAALAELVKTSPNWQKKDDPALQMRHDMVRAKISAFMEREDTVYRRYPRSD
HCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TSLPARYAHAITTYLHGDLRSAIEQIDALIKLQPQNPYFYEVRGQALLEGGRPTEAIAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHCCCCCHHHHHHH
RRAVQLSRNAPLIEMLLGQALVASNNKANADEAIAILRTALVREPEAPLGYSQLAIAYGR
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
KGDYAQADLASAQAAFLRGDNKTARELASRAKTRFAIGTPGWVKADDIVSSKIPDKK
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MIPKALTNEDMTRRPVTPLRRSVSKLMTLVTACAIANASFPAQAQQDKGLPMLRDSETEQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHH
LLRDYTRPILRAAGLQKHNIQMVIINDRSFNAFVADGRRIFVNYGAISKSTTPNQLIGVL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEEEECCCCCCCCHHHHHHHH
AHETGHLAGGHLSKFREQLARTQTQLIIAMLLGAGALAAGAGRGGSNSPGSNIGAAALSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCC
PQEIARRSLLGYQRQQEENADRAAVKFLNATGQSPRGMYETFKRFTDESLFAARGADPYA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCCCCH
QSHPMPADRVAALAELVKTSPNWQKKDDPALQMRHDMVRAKISAFMEREDTVYRRYPRSD
HCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TSLPARYAHAITTYLHGDLRSAIEQIDALIKLQPQNPYFYEVRGQALLEGGRPTEAIAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHCCCCCHHHHHHH
RRAVQLSRNAPLIEMLLGQALVASNNKANADEAIAILRTALVREPEAPLGYSQLAIAYGR
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
KGDYAQADLASAQAAFLRGDNKTARELASRAKTRFAIGTPGWVKADDIVSSKIPDKK
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]