| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675889
Identifier: 75675889
GI number: 75675889
Start: 1850246
End: 1852063
Strand: Direct
Name: 75675889
Synonym: Nwi_1697
Alternate gene names: NA
Gene position: 1850246-1852063 (Clockwise)
Preceding gene: 75675886
Following gene: 75675891
Centisome position: 54.39
GC content: 55.78
Gene sequence:
>1818_bases ATGCCTGGGACGTCAACTTGCAAACGGATTCGCAATTCGATCAGTCGTTTTGATCGGGATATCCGAGCTAACATCGCGCC CATTTTCGCGATCGCGCTGCTGCCGGTATTGGGCTTCGTGGGCGCCGCCGTCGATTATACGCGAGCGAACGCGGCCCGCT CGTCGATGCAGGCGGCCATGGATTCGGCGGTGCTGATGGTTTCCAGGGATGCCGCGGCGAATCCGGCCATGACGTCCCAG CAGATCACTGACGCGGTGCAGCGCTACTTTAACTCACTTTATAATGACAAAAGCGCATTCAATGTCAGCGTAAGCGCGGC CTATACCCCGAGCACGTCATCGGCGGCGGCGAAGATCCTCGCCTCCGGACAGGGCGCGATCGAAACCGATTTCATGAAAA TCGCCGGCTTTCCGCAGCTCAGCTTCGGAACCAGTTCCACGTCCACGTGGGGCAATTCGCGAATGAGGGTCGCGCTGGTC CTCGATAACACCGGGTCGATGCGCGACAACGGCAAGATGGCCGCGCTGCAACGGGCAGCCAAGGACATGATCGACTCACT GTCGGCTTTCGCCAAAACCGCCGACGACGTCTACATTTCGATCATTCCTTTCGCAAAGGACGTTAACGTCGACAAGTCAA ACTATAACGCAGCCTGGATCAACTGGACCGAATGGGAAGCTGAGCCTCCGATTCTCATTGAGGAAAATTATCCCATCAAT GTAAGATACAACGGTCTGACCTATGACAAATGGGAAGATATTGGTCCTGGTGCCCCCTGTCCATTCGATACACGAAACAA TGGCAGCCCTCGGCCAACCCAAAATAGTCGCGTAGGTAAATTCAGTTTTGCTTGTATGGACCGCCCAGGCTCCCTTTCCG GCGCAACAGACCTCAGCAGCCTATACACCAATCGATATCTAATTCCGTCAGATCCGAGCGGAAAGTATTATGGCATGATC TGCCCTGGCATCGACGGTGGAGCAAAGTTCCCTAGGAAAAGGGATATTTACTACAACGGTTGCTATACCAGCGTTGTAGA TACGGACAGAAGTGTAGTCGTTTCAACGGGATCTGGCGCAAGCTGCCCCAGCACCACACCAAATTGTTCATGCACGGGCA GCGGCAGGAACCGCAAATGCACCCAAGCAAAGTACAAGCATTACTGGCGCGCCCACCCGACTGACACCAATCAGGCGAAA GATGCCGCTCCTGCTCACAGCACCTGGACCGGTTGCATCAACGATCGCGATCAGGCCTACGACATCTCCAATGCCGATCC CTCTTCAGGCAGCAGCGGAACACCCTCCACGAAGTTCTACGCCGAACAGTTGAACGGCTGTCTTCCGGCCACCATTACGC CCGTGAGTTCTCAATCGAGTACCCTGAAGAACCAGATCGACTCGATGTCGCCCAGCGGTAGTACGAACCAGGCCATCGGT CTCGCCTGGGGATGGCAGACGCTGAGTACCACGAACGGCCCCTTCCCGGCGCCCGCCAAGGATAAAGCATATGTCTATCA GGACTATCTGGTACTCTTGTCTGACGGCTTGAACACGCGGAACCGCTGGTCTGGCAACGGAAGCGACCACTCGCCGGAGG TCGATGTGCGGCAGGCGCTGCTATGTCAGAAGGTCAAGGACAGCGGCACCGTCATTTTCACTGTCCAGGTCAATGTCGGC AACAGGGATCCGCTATCCCAGGTGCTACAGGACTGCGCTTCCAACGGAAATTTTCAGATGATCACGTCGGCTAACCAGAC TGCCGACGCTTTTCAGAACATCCTCACGCAAATCTCGCAACTCCGCATCGCCAAATAA
Upstream 100 bases:
>100_bases GCAATTTGTGCGGCTATTTACCTGCTTTCTCAGGACAACTTTACCACCCGTTTAGCCGGGACGCCCGAAATGCGCTGGAG CCAACGGATCGGTGACAGCC
Downstream 100 bases:
>100_bases CGGGGAGCCTTTCCGCTTCTGATTGAATCAGAAGCGGGGCTCTATGATATTGTTTTGACGCGTTTTCTTCACGCGAACCG GTGTCCACTTCGCTCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: TadE Family Protein; Flp Pilus Assembly Protein TadG
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MPGTSTCKRIRNSISRFDRDIRANIAPIFAIALLPVLGFVGAAVDYTRANAARSSMQAAMDSAVLMVSRDAAANPAMTSQ QITDAVQRYFNSLYNDKSAFNVSVSAAYTPSTSSAAAKILASGQGAIETDFMKIAGFPQLSFGTSSTSTWGNSRMRVALV LDNTGSMRDNGKMAALQRAAKDMIDSLSAFAKTADDVYISIIPFAKDVNVDKSNYNAAWINWTEWEAEPPILIEENYPIN VRYNGLTYDKWEDIGPGAPCPFDTRNNGSPRPTQNSRVGKFSFACMDRPGSLSGATDLSSLYTNRYLIPSDPSGKYYGMI CPGIDGGAKFPRKRDIYYNGCYTSVVDTDRSVVVSTGSGASCPSTTPNCSCTGSGRNRKCTQAKYKHYWRAHPTDTNQAK DAAPAHSTWTGCINDRDQAYDISNADPSSGSSGTPSTKFYAEQLNGCLPATITPVSSQSSTLKNQIDSMSPSGSTNQAIG LAWGWQTLSTTNGPFPAPAKDKAYVYQDYLVLLSDGLNTRNRWSGNGSDHSPEVDVRQALLCQKVKDSGTVIFTVQVNVG NRDPLSQVLQDCASNGNFQMITSANQTADAFQNILTQISQLRIAK
Sequences:
>Translated_605_residues MPGTSTCKRIRNSISRFDRDIRANIAPIFAIALLPVLGFVGAAVDYTRANAARSSMQAAMDSAVLMVSRDAAANPAMTSQ QITDAVQRYFNSLYNDKSAFNVSVSAAYTPSTSSAAAKILASGQGAIETDFMKIAGFPQLSFGTSSTSTWGNSRMRVALV LDNTGSMRDNGKMAALQRAAKDMIDSLSAFAKTADDVYISIIPFAKDVNVDKSNYNAAWINWTEWEAEPPILIEENYPIN VRYNGLTYDKWEDIGPGAPCPFDTRNNGSPRPTQNSRVGKFSFACMDRPGSLSGATDLSSLYTNRYLIPSDPSGKYYGMI CPGIDGGAKFPRKRDIYYNGCYTSVVDTDRSVVVSTGSGASCPSTTPNCSCTGSGRNRKCTQAKYKHYWRAHPTDTNQAK DAAPAHSTWTGCINDRDQAYDISNADPSSGSSGTPSTKFYAEQLNGCLPATITPVSSQSSTLKNQIDSMSPSGSTNQAIG LAWGWQTLSTTNGPFPAPAKDKAYVYQDYLVLLSDGLNTRNRWSGNGSDHSPEVDVRQALLCQKVKDSGTVIFTVQVNVG NRDPLSQVLQDCASNGNFQMITSANQTADAFQNILTQISQLRIAK >Mature_604_residues PGTSTCKRIRNSISRFDRDIRANIAPIFAIALLPVLGFVGAAVDYTRANAARSSMQAAMDSAVLMVSRDAAANPAMTSQQ ITDAVQRYFNSLYNDKSAFNVSVSAAYTPSTSSAAAKILASGQGAIETDFMKIAGFPQLSFGTSSTSTWGNSRMRVALVL DNTGSMRDNGKMAALQRAAKDMIDSLSAFAKTADDVYISIIPFAKDVNVDKSNYNAAWINWTEWEAEPPILIEENYPINV RYNGLTYDKWEDIGPGAPCPFDTRNNGSPRPTQNSRVGKFSFACMDRPGSLSGATDLSSLYTNRYLIPSDPSGKYYGMIC PGIDGGAKFPRKRDIYYNGCYTSVVDTDRSVVVSTGSGASCPSTTPNCSCTGSGRNRKCTQAKYKHYWRAHPTDTNQAKD AAPAHSTWTGCINDRDQAYDISNADPSSGSSGTPSTKFYAEQLNGCLPATITPVSSQSSTLKNQIDSMSPSGSTNQAIGL AWGWQTLSTTNGPFPAPAKDKAYVYQDYLVLLSDGLNTRNRWSGNGSDHSPEVDVRQALLCQKVKDSGTVIFTVQVNVGN RDPLSQVLQDCASNGNFQMITSANQTADAFQNILTQISQLRIAK
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65311; Mature: 65180
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTSTCKRIRNSISRFDRDIRANIAPIFAIALLPVLGFVGAAVDYTRANAARSSMQAAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAVLMVSRDAAANPAMTSQQITDAVQRYFNSLYNDKSAFNVSVSAAYTPSTSSAAAKIL CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHH ASGQGAIETDFMKIAGFPQLSFGTSSTSTWGNSRMRVALVLDNTGSMRDNGKMAALQRAA HCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH KDMIDSLSAFAKTADDVYISIIPFAKDVNVDKSNYNAAWINWTEWEAEPPILIEENYPIN HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEE VRYNGLTYDKWEDIGPGAPCPFDTRNNGSPRPTQNSRVGKFSFACMDRPGSLSGATDLSS EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH LYTNRYLIPSDPSGKYYGMICPGIDGGAKFPRKRDIYYNGCYTSVVDTDRSVVVSTGSGA HHHCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCCCC SCPSTTPNCSCTGSGRNRKCTQAKYKHYWRAHPTDTNQAKDAAPAHSTWTGCINDRDQAY CCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE DISNADPSSGSSGTPSTKFYAEQLNGCLPATITPVSSQSSTLKNQIDSMSPSGSTNQAIG ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEE LAWGWQTLSTTNGPFPAPAKDKAYVYQDYLVLLSDGLNTRNRWSGNGSDHSPEVDVRQAL EEECCEEECCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHH LCQKVKDSGTVIFTVQVNVGNRDPLSQVLQDCASNGNFQMITSANQTADAFQNILTQISQ HHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH LRIAK HHCCC >Mature Secondary Structure PGTSTCKRIRNSISRFDRDIRANIAPIFAIALLPVLGFVGAAVDYTRANAARSSMQAAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAVLMVSRDAAANPAMTSQQITDAVQRYFNSLYNDKSAFNVSVSAAYTPSTSSAAAKIL CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHH ASGQGAIETDFMKIAGFPQLSFGTSSTSTWGNSRMRVALVLDNTGSMRDNGKMAALQRAA HCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH KDMIDSLSAFAKTADDVYISIIPFAKDVNVDKSNYNAAWINWTEWEAEPPILIEENYPIN HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEE VRYNGLTYDKWEDIGPGAPCPFDTRNNGSPRPTQNSRVGKFSFACMDRPGSLSGATDLSS EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH LYTNRYLIPSDPSGKYYGMICPGIDGGAKFPRKRDIYYNGCYTSVVDTDRSVVVSTGSGA HHHCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCCCC SCPSTTPNCSCTGSGRNRKCTQAKYKHYWRAHPTDTNQAKDAAPAHSTWTGCINDRDQAY CCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE DISNADPSSGSSGTPSTKFYAEQLNGCLPATITPVSSQSSTLKNQIDSMSPSGSTNQAIG ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEE LAWGWQTLSTTNGPFPAPAKDKAYVYQDYLVLLSDGLNTRNRWSGNGSDHSPEVDVRQAL EEECCEEECCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHH LCQKVKDSGTVIFTVQVNVGNRDPLSQVLQDCASNGNFQMITSANQTADAFQNILTQISQ HHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH LRIAK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA