| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675759
Identifier: 75675759
GI number: 75675759
Start: 1710440
End: 1711216
Strand: Direct
Name: 75675759
Synonym: Nwi_1567
Alternate gene names: NA
Gene position: 1710440-1711216 (Clockwise)
Preceding gene: 75675757
Following gene: 75675760
Centisome position: 50.28
GC content: 62.68
Gene sequence:
>777_bases ATGAGCAAGCTACTGATCGGAGCCGTCAGCGCTCTTGCTATTGGCCTCGGCGCTGTTGCGCCAGCCGCCGCGGCCGACCT TGCTCCACGTCCCTATACGAAGGCCCCTCCTCCAATGATGGCCGCAATCTACGACTGGAGCGGCTTCTACATCGGTGCGA ACGGTGGCTGGGGATCGAGCAGGAATTGCTGGGACTTCACGACGCCCGCAGGTGTTTTCGTCGCGAACGAAGGTTGCCAT AACGCAACCGGCGGCACGGCCGGCGGCCAGATCGGCTATCGCTGGCAGGCCACCAACTGGCTGTTCGGCCTCGAGGCTCA AGGCAACTGGGCTGATCTGAGCGGCCGCAATGTCAGCCTCGCCTTCCCGGCTTTCACCAACAACAGCAATTTGAACGCGT TCGGCCTGTTCACCGGCCAGATCGGTTACGCCTGGGATGCCACCTTGCTCTATGTGAAGGGCGGCGCCGCCGTGACGTCC AACCGATACCGGAGCCTTGTTACCGCGACCGGCGTTCAGGCAACCGACAGTGTCAACAACAACCGCTGGGGTGCGGTCGT GGGCGTCGGCCTGGAATACGGGTTCGCGCCGAACTGGTCGCTCGCCTTCGAGTACGATCACATCTTCATGGGCAACAGCA GGCACACCTTCACCAACAATGGCGTTGCCGGAGCCGCCGGTACGCTGTTTGGAACGGACAACATCAGCCAGGACGTGGAC ATCGTCACCGCGCGCATCAATTACCGTTGGGGTGGCCCCGCCATCGCGCGGTACTGA
Upstream 100 bases:
>100_bases TTTGTCGCGTCGGAGAGTATAAATGATTCACAAATTTCGGGGTGAATACCGGCGCTCGCGCTTTAACGGTTGAAATTAAA GAATAATCAGGGGGATCGAA
Downstream 100 bases:
>100_bases TCGCGCCTGATCCGATTTCCCTGGTAAACTCCTCAAGGCCGGCTTTCGCCGGCCTTTTTTTTGCGTCGGGATCCAGTGCG TGTTCGCAAGAATCGCCAGG
Product: putative outer-membrane protein precursor
Products: NA
Alternate protein names: Outer-Membrane Protein; Outer-Membrane Immunogenic Protein; OmpA-Like Transmembrane Region; Outer-Membrane Protein Putative Secreted Protein; OmpA Domain Protein Transmembrane Region-Containing Protein; OmpA Domain-Containing Protein; Uter-Membrane Protein.; Outer Membrane Autotransporter Barrel
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSKLLIGAVSALAIGLGAVAPAAAADLAPRPYTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCH NATGGTAGGQIGYRWQATNWLFGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTS NRYRSLVTATGVQATDSVNNNRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNNGVAGAAGTLFGTDNISQDVD IVTARINYRWGGPAIARY
Sequences:
>Translated_258_residues MSKLLIGAVSALAIGLGAVAPAAAADLAPRPYTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCH NATGGTAGGQIGYRWQATNWLFGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTS NRYRSLVTATGVQATDSVNNNRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNNGVAGAAGTLFGTDNISQDVD IVTARINYRWGGPAIARY >Mature_257_residues SKLLIGAVSALAIGLGAVAPAAAADLAPRPYTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCHN ATGGTAGGQIGYRWQATNWLFGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTSN RYRSLVTATGVQATDSVNNNRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNNGVAGAAGTLFGTDNISQDVDI VTARINYRWGGPAIARY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27200; Mature: 27068
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLIGAVSALAIGLGAVAPAAAADLAPRPYTKAPPPMMAAIYDWSGFYIGANGGWGSS CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCC RNCWDFTTPAGVFVANEGCHNATGGTAGGQIGYRWQATNWLFGLEAQGNWADLSGRNVSL CCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEECCCCEEEE AFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTSNRYRSLVTATGVQATDSVNN EEEEECCCCCCEEEEEEECCCCCEECEEEEEEECCCEEECCHHEEEEEECCCEEECCCCC NRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNNGVAGAAGTLFGTDNISQDVD CCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEECCCCCCCEE IVTARINYRWGGPAIARY EEEEEEEEEECCCCCCCC >Mature Secondary Structure SKLLIGAVSALAIGLGAVAPAAAADLAPRPYTKAPPPMMAAIYDWSGFYIGANGGWGSS CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCC RNCWDFTTPAGVFVANEGCHNATGGTAGGQIGYRWQATNWLFGLEAQGNWADLSGRNVSL CCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEECCCCEEEE AFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTSNRYRSLVTATGVQATDSVNN EEEEECCCCCCEEEEEEECCCCCEECEEEEEEECCCEEECCHHEEEEEECCCEEECCCCC NRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNNGVAGAAGTLFGTDNISQDVD CCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEECCCCCCCEE IVTARINYRWGGPAIARY EEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA