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The map label for this gene is czcB [H]

Identifier: 75675648

GI number: 75675648

Start: 1586690

End: 1587682

Strand: Direct

Name: czcB [H]

Synonym: Nwi_1456

Alternate gene names: 75675648

Gene position: 1586690-1587682 (Clockwise)

Preceding gene: 75675647

Following gene: 75675649

Centisome position: 46.64

GC content: 59.82

Gene sequence:

>993_bases
ATGATCAAGAGATTCACGATAATCATATTCGCCGTCGTGGTGCTTGCGGTCGCAGGGATCGGCTATCGCATGTTGGATCT
GACAGACCCCGGTGTTCCCGCATTGCGTGAGGATCACGATCACACGATCCATGAGTTCAAGCGGGGGCATGTCGAGGAGG
ATGAGCATGGCGCCAAGCGCATCCTGATCAGCGACGTCAAACTCGCGGCCGCCGGGGCGGTGCTTGCCGAGGCCGGAGAG
GTCACGCTCAGCGACACGCTATCGTTCAACGGCGTGTTGCGGGCCAATCAGGAGACTGTGGTTCAGGTCACGCCGCGGTT
TCCGGGCATCGTCCGGTCGATCAGGAAAAGGATCGGGGACACCGTCGCAGGTAACGACCTGCTTGCATCGATCGAAAGCA
ACCAGAGTCTCACCGTTTACGATCTGAAAGCGCCGATCAGCGGGACCGTGATCGATCGCCAGATATCGCTCGGCGAGTAT
GCCTCGGAACAGAAGCCTGCCTTCGTGGTCGCGGACCTGTCGACGATCTGGGTCGACCTTTCGATCTATCGTCAGGACCT
GAAACGGGTTCGAACCGGTGATGAAGTGCTGATCGATCCGGATGACGGCGGCGCGGACATCAAGGGGCACATCTCTTATG
TCGCGCCGATCGGATCAATCGACACGCAGACCGCGATCGCCCGGATCGTCCTGACCAACACCGATGGGCGCCTGCGTCCC
GGACTGTTCGTCACGGCCAGGCTTGTCCTGACAAAACGCAGCGTACCGGTTGCCGTTCGCGCGGGAGCGATCCAGATGCT
GGACAATAAGACGGTCGTGTTCGTTCGGGAGGACCAAGACAAGATCGAGGCTCGTCCGGTCGTGGTCGGAGAATCTGATG
CGAGGTTCGTGGAGATTCGAGCCGGCATGGTGGCGGGAGAGCCCTATGTCGCCGAAAACAGCTTCGTTGTGAAAGCGGAG
ATGGGGAAGGGCGAGGGCGAGCATGATCATTGA

Upstream 100 bases:

>100_bases
GCCTGCGTGAGCAGGAGGCGCAGCAGAACTTTCACGTAGGCGTCGCGACGATCGAGGGTCTGGTCGGCAATCCGTTCGCG
TTGGCGCGAGGGGGCGTCCG

Downstream 100 bases:

>100_bases
TGCTGTTCTTGCCTTCTCCATTCGCCAGCGATGGCTGATGATGCTGTTCGTGCTGGGGATCGGCGTCCTCGGAGCGTGGA
ATTTCACGAGGCTTCCCATC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIKRFTIIIFAVVVLAVAGIGYRMLDLTDPGVPALREDHDHTIHEFKRGHVEEDEHGAKRILISDVKLAAAGAVLAEAGE
VTLSDTLSFNGVLRANQETVVQVTPRFPGIVRSIRKRIGDTVAGNDLLASIESNQSLTVYDLKAPISGTVIDRQISLGEY
ASEQKPAFVVADLSTIWVDLSIYRQDLKRVRTGDEVLIDPDDGGADIKGHISYVAPIGSIDTQTAIARIVLTNTDGRLRP
GLFVTARLVLTKRSVPVAVRAGAIQMLDNKTVVFVREDQDKIEARPVVVGESDARFVEIRAGMVAGEPYVAENSFVVKAE
MGKGEGEHDH

Sequences:

>Translated_330_residues
MIKRFTIIIFAVVVLAVAGIGYRMLDLTDPGVPALREDHDHTIHEFKRGHVEEDEHGAKRILISDVKLAAAGAVLAEAGE
VTLSDTLSFNGVLRANQETVVQVTPRFPGIVRSIRKRIGDTVAGNDLLASIESNQSLTVYDLKAPISGTVIDRQISLGEY
ASEQKPAFVVADLSTIWVDLSIYRQDLKRVRTGDEVLIDPDDGGADIKGHISYVAPIGSIDTQTAIARIVLTNTDGRLRP
GLFVTARLVLTKRSVPVAVRAGAIQMLDNKTVVFVREDQDKIEARPVVVGESDARFVEIRAGMVAGEPYVAENSFVVKAE
MGKGEGEHDH
>Mature_330_residues
MIKRFTIIIFAVVVLAVAGIGYRMLDLTDPGVPALREDHDHTIHEFKRGHVEEDEHGAKRILISDVKLAAAGAVLAEAGE
VTLSDTLSFNGVLRANQETVVQVTPRFPGIVRSIRKRIGDTVAGNDLLASIESNQSLTVYDLKAPISGTVIDRQISLGEY
ASEQKPAFVVADLSTIWVDLSIYRQDLKRVRTGDEVLIDPDDGGADIKGHISYVAPIGSIDTQTAIARIVLTNTDGRLRP
GLFVTARLVLTKRSVPVAVRAGAIQMLDNKTVVFVREDQDKIEARPVVVGESDARFVEIRAGMVAGEPYVAENSFVVKAE
MGKGEGEHDH

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35838; Mature: 35838

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRFTIIIFAVVVLAVAGIGYRMLDLTDPGVPALREDHDHTIHEFKRGHVEEDEHGAKR
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
ILISDVKLAAAGAVLAEAGEVTLSDTLSFNGVLRANQETVVQVTPRFPGIVRSIRKRIGD
EEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCC
TVAGNDLLASIESNQSLTVYDLKAPISGTVIDRQISLGEYASEQKPAFVVADLSTIWVDL
CCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCHHCCCCCCEEEEEEHHHHEEEH
SIYRQDLKRVRTGDEVLIDPDDGGADIKGHISYVAPIGSIDTQTAIARIVLTNTDGRLRP
HHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
GLFVTARLVLTKRSVPVAVRAGAIQMLDNKTVVFVREDQDKIEARPVVVGESDARFVEIR
CCEEEEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCEEECCCCCEEEEEE
AGMVAGEPYVAENSFVVKAEMGKGEGEHDH
ECEEECCCEEECCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MIKRFTIIIFAVVVLAVAGIGYRMLDLTDPGVPALREDHDHTIHEFKRGHVEEDEHGAKR
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
ILISDVKLAAAGAVLAEAGEVTLSDTLSFNGVLRANQETVVQVTPRFPGIVRSIRKRIGD
EEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCC
TVAGNDLLASIESNQSLTVYDLKAPISGTVIDRQISLGEYASEQKPAFVVADLSTIWVDL
CCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCHHCCCCCCEEEEEEHHHHEEEH
SIYRQDLKRVRTGDEVLIDPDDGGADIKGHISYVAPIGSIDTQTAIARIVLTNTDGRLRP
HHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
GLFVTARLVLTKRSVPVAVRAGAIQMLDNKTVVFVREDQDKIEARPVVVGESDARFVEIR
CCEEEEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCEEECCCCCEEEEEE
AGMVAGEPYVAENSFVVKAEMGKGEGEHDH
ECEEECCCEEECCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]