| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is hflX [H]
Identifier: 75675642
GI number: 75675642
Start: 1580165
End: 1581493
Strand: Direct
Name: hflX [H]
Synonym: Nwi_1450
Alternate gene names: 75675642
Gene position: 1580165-1581493 (Clockwise)
Preceding gene: 75675641
Following gene: 75675643
Centisome position: 46.45
GC content: 63.81
Gene sequence:
>1329_bases ATGCGGGGCGAGCCAACCGGACGAGCGATCGTCATCGGCCCTTACGTGCGGACGCGGGGCGGCGATGCCGAGACGCCGCG ACGATCCCTGCGCAACACCGACGCCCGGCTGGATGAAGCCGCCGGTCTCGCCAAGGCAATCGACCTCCATGTGATTCAGG CGATCGTCGCTCCCGTCAGCCAGATCAGGCCCGCGACATATCTCGGTAAGGGCAAGGTCGAGGAGTTGCAGGGCTTGATC GCCGCCGATGGAGCCGGTCTCGTGGTGATGGACTGCGCGCTGTCGCCCATTCAACAGCGCAATCTGGAAAAGGCCTGGAG CACAAAGGTGCTGGACCGCACCGGCTTGATCCTCGAAATCTTCGGGCGCCGCGCCAAGACCAAAGAGGGCGCGCTTCAGG TCGAACTCGCTCATCTCAACTATCAGCGCAGCCGTCTGGTGCGCTCCTGGACCCACCTCGAACGGCAGCGTGGCGGCTTC GGATTCATGGGCGGGCCCGGCGAAACCCAGATCGAGGCGGATCGCCGCCTGATCGGCGATCGCATCACGCGACTGGAAAA CGAACTCAAGAAGGTGCAGGCGACGCGGCGGCTGCATCGCGCCGGGCGGCAGCGCGTGCCCTATCGCGTGGTCGCGCTGG TCGGCTACACGAATGCCGGCAAATCGACGCTGTTCAATCGATTGACGCGCGCGGACGTTCAGGCCGCCGACATGCTGTTC GCGACGCTCGATCCGACGCTGCGCTCGCTCGCGCTGCCTCACGGCGGAAAGGCCATGCTGTCGGACACCGTCGGATTCAT ATCTAATCTGCCGACCCAGCTCGTCGCTGCTTTCCGCGCGACGTTGGAGGAGGTGATGGAGGCGGACGTTATCCTTCATG TTCGTGACATTTCGCATGAGGATACGGAGCCGCAGCAGCACGATGTCGAAGCCGTGCTGCATCAACTCGGCATCGACCCC GACGGACCGGCGCGCATGATCGAGGTCTGGAACAAGATCGATCGCTTCGATGCGGATCAGCGCAAAGACCTGGAGAACGT GGCTGCACGCCGTTCGACGGATGTGCCGCGTTTTCTTGTTTCTGCCGAAACCGGCGAAGGGGTTGAGACGCTGCTTGCGG CGATCGAGGATCGGCTGGCGGCAACCCGAACCACGCTGGATCTGTCGGTCGACGCCTCGGATGGCGCGGCGATCAGCTGG CTGCATCGGAACTCCGAGGTGCTCGCCAAGGAACTACGCGACGGCCGCTACGACATGACCGTCAGGGTCGATGAGACAAA ACGTGACATACTCGTCAATCGGTATGGCGCGGCGCCACGTCCGCTTTGA
Upstream 100 bases:
>100_bases TGTTTGAAGGCGGCGAGGATGCTCCGCTTTGAGCACATACTTGAAAGTTTCCTGATTGGACCCCCGCCAGTTCGAGGGGA GCACCGACCCGTCGGGGTCG
Downstream 100 bases:
>100_bases TTTCCGCTCGCAAAGCAAGGCCGCGCAAGGATGGTCTTGACCGGCGGAACGCCGGACTATTCCATGTCCATCAAATCACA TGAAAGCCGCAGGAGATTTC
Product: GTP-binding protein, HSR1-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRGEPTGRAIVIGPYVRTRGGDAETPRRSLRNTDARLDEAAGLAKAIDLHVIQAIVAPVSQIRPATYLGKGKVEELQGLI AADGAGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVRSWTHLERQRGGF GFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADMLF ATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDP DGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRFLVSAETGEGVETLLAAIEDRLAATRTTLDLSVDASDGAAISW LHRNSEVLAKELRDGRYDMTVRVDETKRDILVNRYGAAPRPL
Sequences:
>Translated_442_residues MRGEPTGRAIVIGPYVRTRGGDAETPRRSLRNTDARLDEAAGLAKAIDLHVIQAIVAPVSQIRPATYLGKGKVEELQGLI AADGAGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVRSWTHLERQRGGF GFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADMLF ATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDP DGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRFLVSAETGEGVETLLAAIEDRLAATRTTLDLSVDASDGAAISW LHRNSEVLAKELRDGRYDMTVRVDETKRDILVNRYGAAPRPL >Mature_442_residues MRGEPTGRAIVIGPYVRTRGGDAETPRRSLRNTDARLDEAAGLAKAIDLHVIQAIVAPVSQIRPATYLGKGKVEELQGLI AADGAGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVRSWTHLERQRGGF GFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADMLF ATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDP DGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRFLVSAETGEGVETLLAAIEDRLAATRTTLDLSVDASDGAAISW LHRNSEVLAKELRDGRYDMTVRVDETKRDILVNRYGAAPRPL
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=341, Percent_Identity=33.4310850439883, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI310133116, Length=265, Percent_Identity=35.8490566037736, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI310124269, Length=267, Percent_Identity=34.8314606741573, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI310124267, Length=267, Percent_Identity=34.8314606741573, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI310124171, Length=267, Percent_Identity=34.8314606741573, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI310124169, Length=267, Percent_Identity=34.8314606741573, Blast_Score=132, Evalue=7e-31, Organism=Escherichia coli, GI1790615, Length=390, Percent_Identity=42.8205128205128, Blast_Score=272, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17561038, Length=417, Percent_Identity=32.8537170263789, Blast_Score=174, Evalue=7e-44, Organism=Drosophila melanogaster, GI24650079, Length=420, Percent_Identity=32.8571428571429, Blast_Score=161, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 48925; Mature: 48925
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGEPTGRAIVIGPYVRTRGGDAETPRRSLRNTDARLDEAAGLAKAIDLHVIQAIVAPVS CCCCCCCCEEEEECCEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIRPATYLGKGKVEELQGLIAADGAGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEI HCCCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH FGRRAKTKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGD HCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH RITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADMLF HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHE HHHCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC DTEPQQHDVEAVLHQLGIDPDGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRFLV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE SAETGEGVETLLAAIEDRLAATRTTLDLSVDASDGAAISWLHRNSEVLAKELRDGRYDMT ECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCEEEE VRVDETKRDILVNRYGAAPRPL EEECCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MRGEPTGRAIVIGPYVRTRGGDAETPRRSLRNTDARLDEAAGLAKAIDLHVIQAIVAPVS CCCCCCCCEEEEECCEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIRPATYLGKGKVEELQGLIAADGAGLVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEI HCCCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH FGRRAKTKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGD HCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH RITRLENELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADMLF HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ATLDPTLRSLALPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHE HHHCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC DTEPQQHDVEAVLHQLGIDPDGPARMIEVWNKIDRFDADQRKDLENVAARRSTDVPRFLV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE SAETGEGVETLLAAIEDRLAATRTTLDLSVDASDGAAISWLHRNSEVLAKELRDGRYDMT ECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCEEEE VRVDETKRDILVNRYGAAPRPL EEECCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]