Click here to switch to the map view.

The map label for this gene is ylqH [H]

Identifier: 75675592

GI number: 75675592

Start: 1525743

End: 1526012

Strand: Direct

Name: ylqH [H]

Synonym: Nwi_1400

Alternate gene names: 75675592

Gene position: 1525743-1526012 (Clockwise)

Preceding gene: 75675591

Following gene: 75675593

Centisome position: 44.85

GC content: 65.56

Gene sequence:

>270_bases
ATGAGTGTGGAGACCAGGGATCAGGTCGCCGTCGCCCTCCACTATGACAAGGGCAGCGGCGCACCGCGCGTGGTCGCCAA
GGGCAGGGGATCACTCGGCGCGAAGATCATCGAGGTGGCCAACGAGCACGACATCCCGATCGAGCAGAACGAGGTGCTGG
CCGACGCGCTGTCGCATGTCGAGCTTGGCGATGAGATTCCGGCCGAGCTGTACAAGGCCGTCGCGGAGGTATTGGTGTTC
GTGCTGCGGATGTCGGGGCGCGCGCCCTGA

Upstream 100 bases:

>100_bases
TGAGCCGCGCCGAATTGCAGCCGGGAGATATCATCATCGGCGAGGGCGCGCCGCCGCAGCCGATTCCCGCGCCTGCCGGC
CACTTTCTGGATCGCGCCCT

Downstream 100 bases:

>100_bases
TCAGGTGACGGCGCCGCCTCCGCGCCGCGCCTGTTGGTGACAGCCTCAAAAACGGCGGTTAGGGTCTAATCCAAGTTCAT
TGAACCAGACCAGGCACGGC

Product: type III secretion proteins, related to flagellar biosynthesis protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSVETRDQVAVALHYDKGSGAPRVVAKGRGSLGAKIIEVANEHDIPIEQNEVLADALSHVELGDEIPAELYKAVAEVLVF
VLRMSGRAP

Sequences:

>Translated_89_residues
MSVETRDQVAVALHYDKGSGAPRVVAKGRGSLGAKIIEVANEHDIPIEQNEVLADALSHVELGDEIPAELYKAVAEVLVF
VLRMSGRAP
>Mature_88_residues
SVETRDQVAVALHYDKGSGAPRVVAKGRGSLGAKIIEVANEHDIPIEQNEVLADALSHVELGDEIPAELYKAVAEVLVFV
LRMSGRAP

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788188, Length=84, Percent_Identity=42.8571428571429, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 9519; Mature: 9388

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVETRDQVAVALHYDKGSGAPRVVAKGRGSLGAKIIEVANEHDIPIEQNEVLADALSHV
CCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
ELGDEIPAELYKAVAEVLVFVLRMSGRAP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVETRDQVAVALHYDKGSGAPRVVAKGRGSLGAKIIEVANEHDIPIEQNEVLADALSHV
CCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
ELGDEIPAELYKAVAEVLVFVLRMSGRAP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]