| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75675513
Identifier: 75675513
GI number: 75675513
Start: 1452287
End: 1452715
Strand: Direct
Name: 75675513
Synonym: Nwi_1321
Alternate gene names: NA
Gene position: 1452287-1452715 (Clockwise)
Preceding gene: 75675512
Following gene: 75675514
Centisome position: 42.69
GC content: 60.84
Gene sequence:
>429_bases ATGACAGTACGTGCCATTCTCAGCGCCAAGGGTCCTCAAGTCGCAAGCGTCGAACCCGACGTGAAGCTTTCGGCGGCGCT CAGGATTTTATCTGAGCGGCAGATCGGGTCCGTTATCGTCGTGAGCGGTGCGCGCATAGAGGGCATTCTGTCCGAGCGGG ATGTTGTCCGCGCGCTTGATGAGCACGGCGCGGCGGCGCTCGACCAACCGGTCAGCGCCGCCATGACTCGCAAGGTTGTC AGTTGCCGCCTGTCGGATACGGTTGCTCACCTCATGGAAGTCATGACGGCGGAAAGGTTCAGGCATCTGCCGGTGGTGGA GGAGGGAAAGTTGGTAGGCCTGGTCTCGATCGGGGACGTCGTGAAACTGCGACTTCAGCACTACGAAGCCGAGCAGGAGG CGCTACGCGACTACATCAACATGGCCTGA
Upstream 100 bases:
>100_bases ACGTTTAGCTTTCGCCTGAATGCTAAACGGCAAGGATCGCGCAAAGTGATCCCGCGCGATCCCCGCAAGGGAAGCGACGT CCCTCCAAGGGAGGCCGACC
Downstream 100 bases:
>100_bases ACACGTTTCCTATTAGGGCCAATCGACATTCAGGATTCCCAAGATGCGTAATCGCTGATTCATAGGGTTCCGTGACTTGC ACGGAGCGTGTGATGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTVRAILSAKGPQVASVEPDVKLSAALRILSERQIGSVIVVSGARIEGILSERDVVRALDEHGAAALDQPVSAAMTRKVV SCRLSDTVAHLMEVMTAERFRHLPVVEEGKLVGLVSIGDVVKLRLQHYEAEQEALRDYINMA
Sequences:
>Translated_142_residues MTVRAILSAKGPQVASVEPDVKLSAALRILSERQIGSVIVVSGARIEGILSERDVVRALDEHGAAALDQPVSAAMTRKVV SCRLSDTVAHLMEVMTAERFRHLPVVEEGKLVGLVSIGDVVKLRLQHYEAEQEALRDYINMA >Mature_141_residues TVRAILSAKGPQVASVEPDVKLSAALRILSERQIGSVIVVSGARIEGILSERDVVRALDEHGAAALDQPVSAAMTRKVVS CRLSDTVAHLMEVMTAERFRHLPVVEEGKLVGLVSIGDVVKLRLQHYEAEQEALRDYINMA
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 15425; Mature: 15294
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRAILSAKGPQVASVEPDVKLSAALRILSERQIGSVIVVSGARIEGILSERDVVRALD CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH EHGAAALDQPVSAAMTRKVVSCRLSDTVAHLMEVMTAERFRHLPVVEEGKLVGLVSIGDV HCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHH VKLRLQHYEAEQEALRDYINMA HHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure TVRAILSAKGPQVASVEPDVKLSAALRILSERQIGSVIVVSGARIEGILSERDVVRALD CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH EHGAAALDQPVSAAMTRKVVSCRLSDTVAHLMEVMTAERFRHLPVVEEGKLVGLVSIGDV HCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHH VKLRLQHYEAEQEALRDYINMA HHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA